Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB1P1B2RPK0 AL035425.3-201ENST00000564206 4996 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC138393.1-203ENST00000327086 343 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RPL9P7-201ENST00000330965 580 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 SNORA24.1-201ENST00000384401 135 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 Y_RNA.623-201ENST00000411128 95 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RNA5SP111-201ENST00000411386 101 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AL353621.1-201ENST00000418219 243 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AL160275.3-201ENST00000423876 471 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RPS24P1-201ENST00000438550 371 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC012308.1-201ENST00000451232 178 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 BZW1P2-201ENST00000473537 826 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RN7SL297P-201ENST00000483161 293 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RBBP4P6-201ENST00000508098 202 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RNU6-232P-201ENST00000517144 64 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 MIR6895-201ENST00000613497 78 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 AC092656.1-203ENST00000624134 423 ntBASIC3.07□□□□□ -1.92
HMGB1P1B2RPK0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 OR56A5-201ENST00000340110 738 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 MIR10A-201ENST00000385043 110 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AL139039.1-201ENST00000401900 692 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 RNU2-39P-201ENST00000410604 198 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AIMP1P2-201ENST00000425294 312 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 RPS29P7-201ENST00000439662 171 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 MTND1P30-201ENST00000441241 901 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC003071.1-201ENST00000451219 789 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 RPS29P2-201ENST00000479278 136 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AP003467.2-201ENST00000520175 319 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC009127.3-201ENST00000570531 403 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC005771.1-201ENST00000585581 349 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC009977.1-201ENST00000586015 570 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC015871.2-201ENST00000603605 948 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC087045.1-201ENST00000605856 382 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AC093788.1-201ENST00000609356 927 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AL161423.1-201ENST00000613700 262 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HMGB1P1B2RPK0 RBBP8P1-201ENST00000449447 1844 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 GNG5P1-201ENST00000255500 204 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 MIR144-201ENST00000384886 86 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 RNA5SP270-201ENST00000411361 118 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC073063.1-201ENST00000434352 607 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 MTCO2P29-201ENST00000465212 189 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC022616.3-201ENST00000523940 148 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 ELOCP31-201ENST00000540463 467 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 RPS15AP11-201ENST00000594193 385 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AL670379.4-201ENST00000605279 254 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AC022202.1-201ENST00000613515 211 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AL356863.1-201ENST00000623378 1080 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 AL157786.1-207ENST00000627771 695 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 MIR6830-201ENST00000636015 70 ntBASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HMGB1P1B2RPK0 SNORA20.2-201ENST00000383922 131 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 RPS3AP36-201ENST00000398190 775 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 SNORD23.1-201ENST00000408212 104 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 AC127391.1-201ENST00000411737 98 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 AC104850.1-201ENST00000435940 476 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 TAF9P1-201ENST00000445421 515 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.04□□□□□ -1.92
HMGB1P1B2RPK0 AC011753.1-201ENST00000451001 220 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms