Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AL591043.1-201ENST00000432461 424 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 USP9YP35-201ENST00000435696 412 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC005908.1-201ENST00000468701 347 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC111000.5-201ENST00000506559 1178 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 AC025588.3-201ENST00000604182 274 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 OR4G1P-203ENST00000641984 1631 ntBASIC0.56□□□□□ -2.32
CPSF4LA6NMK7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 MTND5P35-201ENST00000557537 1720 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 Y_RNA.67-201ENST00000362870 100 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 SNORA25.8-201ENST00000364831 128 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 RNU6-31P-201ENST00000384388 108 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 MIR518A2-201ENST00000384966 87 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 SSXP10-201ENST00000402595 565 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 ISCA1P6-201ENST00000427740 390 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AL589880.1-201ENST00000448271 287 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 RNU6-775P-201ENST00000459318 96 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 SNORA31.6-201ENST00000516241 130 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AP003484.1-201ENST00000530974 250 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 OR8K4P-201ENST00000534608 872 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 MTCYBP27-201ENST00000555160 670 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC087465.1-201ENST00000560574 245 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC023825.1-201ENST00000566704 1030 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AP001269.3-201ENST00000588718 329 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 WISP1-OT1-201ENST00000602893 642 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 BNIP3P10-201ENST00000605360 577 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AC069294.1-201ENST00000608397 350 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AL138478.1-201ENST00000612252 832 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 AL589743.7-201ENST00000612637 233 ntBASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.55□□□□□ -2.32
CPSF4LA6NMK7 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 RNU6-98P-201ENST00000384173 107 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 RNU6-17P-201ENST00000384245 107 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 RNU6-18P-201ENST00000384527 107 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 RPL37P10-201ENST00000412884 288 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 CR848007.2-201ENST00000424918 787 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 FO393414.1-201ENST00000428697 1184 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 MTND2P29-201ENST00000438595 412 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 CR769776.1-201ENST00000441254 787 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC023512.1-201ENST00000444513 499 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AL078601.1-201ENST00000444542 271 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AL590365.1-201ENST00000450788 243 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC104057.1-201ENST00000515547 497 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 RNA5SP384-201ENST00000516615 116 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC034114.1-201ENST00000520293 285 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC135279.1-201ENST00000543493 504 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AL391261.3-201ENST00000557194 520 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 HMGN2P15-201ENST00000585707 270 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC110792.4-201ENST00000609843 298 ntBASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CPSF4LA6NMK7 AC068700.1-201ENST00000565862 3754 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 NDUFS5P1-201ENST00000405668 289 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 PRPS1P1-201ENST00000445305 876 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 RPL31P53-201ENST00000457065 348 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AC098591.2-201ENST00000510152 315 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 HAUS1P3-201ENST00000523909 662 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 HSPE1P4-201ENST00000550617 308 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 POLR2KP1-201ENST00000553226 168 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 CYP3A137P-201ENST00000562436 69 ntBASIC0.53□□□□□ -2.32
CPSF4LA6NMK7 MIR4422-201ENST00000581938 83 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms