Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TPMTP3-201ENST00000411928 735 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 RSU1P2-202ENST00000437884 485 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC087477.1-201ENST00000465747 340 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AL163540.1-201ENST00000485382 386 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC134050.1-201ENST00000495088 933 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AP002748.2-201ENST00000528671 348 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 MTCO2P2-201ENST00000591258 225 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC012669.1-201ENST00000603209 283 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AL391646.1-201ENST00000603860 190 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AC009229.3-201ENST00000608056 282 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AP002826.1-201ENST00000608835 315 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.31□□□□□ -2.36
LINC01549A6NIU2 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 Y_RNA.327-201ENST00000365201 102 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RNU6-712P-201ENST00000410558 100 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC023141.4-201ENST00000412031 328 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 USP9YP33-201ENST00000412220 421 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC114737.2-201ENST00000421583 173 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RPS27P16-201ENST00000425758 201 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 FDX1P2-201ENST00000450769 375 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RPL26P9-201ENST00000457466 433 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RPS15AP17-201ENST00000470598 390 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RPS26P55-201ENST00000471178 356 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 RN7SKP219-201ENST00000516825 296 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC004812.1-201ENST00000540773 146 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AC010900.2-201ENST00000604508 210 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AL138963.2-201ENST00000605137 226 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 AL354950.1-201ENST00000614150 568 ntBASIC0.3□□□□□ -2.36
LINC01549A6NIU2 SNORD18A-201ENST00000363753 72 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 RNA5SP126-201ENST00000365092 109 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 RNU6-339P-201ENST00000384310 107 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 RNU1-57P-201ENST00000384491 166 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 HMGN1P14-201ENST00000412459 517 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 RPS24P7-201ENST00000416921 246 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC244023.1-201ENST00000426884 112 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC108667.1-201ENST00000428618 249 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 PGBD4P5-201ENST00000445958 426 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 BNIP3P16-201ENST00000589779 534 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC242498.1-201ENST00000604134 111 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC243994.1-201ENST00000618627 109 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 AC090517.3-201ENST00000625170 141 ntBASIC0.29□□□□□ -2.36
LINC01549A6NIU2 RNU6-989P-201ENST00000362756 107 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 RNU6-173P-201ENST00000364215 104 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 RNU6-53P-201ENST00000365367 106 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AL449283.1-202ENST00000418249 604 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AC006512.1-201ENST00000468816 291 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AL121594.1-201ENST00000475906 575 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 BET1P1-201ENST00000482276 359 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 SNORA4.4-201ENST00000515921 135 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.28□□□□□ -2.36
LINC01549A6NIU2 MTCYBP27-201ENST00000555160 670 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AC087465.1-201ENST00000560574 245 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AC073544.2-201ENST00000601155 540 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 WISP1-OT1-201ENST00000602893 642 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 BX322635.1-201ENST00000605804 496 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AL078604.3-201ENST00000615580 211 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 RMST_5.1-201ENST00000618704 126 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 U1.36-201ENST00000620684 176 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 AC018630.2-201ENST00000534866 2403 ntBASIC0.28□□□□□ -2.36
LINC01549A6NIU2 NACAP2-201ENST00000318548 624 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 RNU6-392P-201ENST00000364926 101 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 USP9YP26-201ENST00000421008 661 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AC007742.1-201ENST00000425789 329 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 USP9YP18-201ENST00000425912 695 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AL035410.1-201ENST00000427409 427 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AL591806.2-201ENST00000433122 173 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 USP9YP24-201ENST00000434374 697 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 ELOCP26-201ENST00000436067 329 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 USP9YP17-201ENST00000444617 696 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.27□□□□□ -2.37
LINC01549A6NIU2 PRELID3BP1-201ENST00000457142 540 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AP001025.1-201ENST00000486139 332 ntBASIC0.27□□□□□ -2.37
LINC01549A6NIU2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms