Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC087683.1-201ENST00000591187 441 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC131902.3-201ENST00000611767 581 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 Z99129.1-201ENST00000612510 255 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 AC008250.2-201ENST00000615261 205 ntBASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.8□□□□□ -1.96
TRIM49BA6NDI0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RNU6-859P-201ENST00000362728 107 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RNY4P16-201ENST00000364768 94 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 SNORA23-201ENST00000365128 182 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 U8.9-201ENST00000365667 134 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL21P75-201ENST00000396599 483 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL21P28-201ENST00000401418 483 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL592114.1-201ENST00000403842 483 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 Y_RNA.608-201ENST00000410647 95 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL359704.1-201ENST00000411586 781 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC092047.1-201ENST00000424997 240 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL35AP22-201ENST00000436855 335 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 PIGFP3-201ENST00000441918 722 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC244505.5-201ENST00000443639 207 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 MTND1P27-201ENST00000451117 902 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL590639.1-201ENST00000456484 337 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AP1S2P1-201ENST00000457344 379 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RNA5SP269-201ENST00000459032 137 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL21P39-201ENST00000463605 483 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL21P93-201ENST00000480465 489 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC087190.1-201ENST00000484462 480 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 MTND1P3-201ENST00000484956 952 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 LARP1BP2-201ENST00000486594 519 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC093591.1-201ENST00000491435 481 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 RPL21P16-201ENST00000495531 483 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 NDUFB4P2-201ENST00000509515 391 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 HMGB1P41-201ENST00000520234 440 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC022616.6-201ENST00000520479 119 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC107934.1-201ENST00000522215 217 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 ATP5F1P5-201ENST00000526403 760 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AP002453.2-201ENST00000533503 320 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC009063.1-201ENST00000563342 702 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 MIR4513-201ENST00000581077 86 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL356575.1-201ENST00000603008 283 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AP000787.2-201ENST00000604432 568 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC138749.5-201ENST00000611461 208 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL359198.2-201ENST00000611836 194 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC116165.2-201ENST00000616705 206 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 AC019226.1-201ENST00000625666 515 ntBASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TRIM49BA6NDI0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL138713.1-201ENST00000624026 2130 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RNU6-223P-201ENST00000362830 107 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 U8.3-201ENST00000363321 132 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RNY4P34-201ENST00000364779 95 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 DEFA7P-201ENST00000382676 285 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 Y_RNA.517-201ENST00000384551 106 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RNU6-754P-201ENST00000391166 107 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL162578.1-201ENST00000406202 378 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 ZNF885P-201ENST00000420174 1098 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RPL7P37-201ENST00000425095 738 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL358075.3-201ENST00000426289 226 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 ARL5AP4-201ENST00000430731 512 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL358934.1-201ENST00000432346 324 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 BNIP3P2-201ENST00000441221 577 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RPS15AP27-201ENST00000449183 343 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC008571.1-201ENST00000467232 300 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC055855.1-201ENST00000489563 579 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC138853.1-201ENST00000503549 823 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 SEM1P1-201ENST00000506694 209 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 RNU2-46P-201ENST00000517038 113 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 SETP2-201ENST00000553886 926 ntBASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM49BA6NDI0 MIR4672-201ENST00000583126 81 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms