Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 AL359212.1-201ENST00000556608 614 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC090115.4-201ENST00000609970 188 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 AC099654.7-201ENST00000635788 2127 ntBASIC3.15□□□□□ -1.91
CTAGE9A4FU28 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTAGE9A4FU28 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC073343.1-201ENST00000328239 651 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 RNU6-511P-201ENST00000363496 107 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.402-201ENST00000383972 102 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 RNU6-641P-201ENST00000384006 107 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.450-201ENST00000384198 113 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.573-201ENST00000384763 105 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 CIR1P3-201ENST00000405137 479 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 ELOCP14-201ENST00000428070 331 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 RPS20P5-201ENST00000434808 360 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 ELOCP7-201ENST00000439968 331 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 BNIP3P2-201ENST00000441221 577 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC003071.1-201ENST00000451219 789 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC092989.1-201ENST00000481235 277 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC109927.2-201ENST00000506416 303 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC006445.2-201ENST00000510061 472 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AP000867.2-201ENST00000532468 320 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AL512310.1-201ENST00000548639 172 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC025678.1-201ENST00000567861 338 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 MIR4293-201ENST00000584305 78 ntBASIC3.14□□□□□ -1.91
CTAGE9A4FU28 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CTAGE9A4FU28 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.159-201ENST00000363674 87 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RNU6-1322P-201ENST00000364309 107 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.248-201ENST00000364501 109 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RNU6-39P-201ENST00000384344 107 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 MIR558-201ENST00000384920 94 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 MIR1-2-201ENST00000384961 85 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL357075.1-201ENST00000404107 726 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 SNORA11-201ENST00000408789 128 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RNU2-9P-201ENST00000410194 145 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RNU2-36P-201ENST00000410361 191 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 USP9YP27-201ENST00000418455 438 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL645937.1-202ENST00000421799 937 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL139281.1-201ENST00000422120 335 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 MED13P1-201ENST00000428342 171 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL596276.1-201ENST00000434465 418 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RN7SL863P-201ENST00000462370 296 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC010631.1-201ENST00000474150 156 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 RN7SL297P-201ENST00000483161 293 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC026427.2-201ENST00000506228 536 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.693-201ENST00000516641 110 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC107016.2-201ENST00000547968 190 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 ARL2BPP2-201ENST00000550907 489 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AL133241.1-201ENST00000556832 487 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 HMGB1P6-201ENST00000569046 646 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 MIR4429-201ENST00000580105 73 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 MIR3609-201ENST00000582661 80 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC025449.1-201ENST00000603896 529 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC007014.2-201ENST00000615581 479 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 AC005609.4-201ENST00000625071 447 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 U6.105-201ENST00000637379 88 ntBASIC3.13□□□□□ -1.91
CTAGE9A4FU28 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.13□□□□□ -1.91
CTAGE9A4FU28 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RNU5A-1-201ENST00000362698 116 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RNY4P14-201ENST00000363656 96 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RNU5E-6P-201ENST00000365574 115 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 MIR183-201ENST00000384958 110 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AL031121.1-201ENST00000406553 254 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RNU2-39P-201ENST00000410604 198 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RAC1P6-201ENST00000423911 575 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AC008850.1-201ENST00000427546 362 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RPL7L1P10-201ENST00000427790 463 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 RPL7P54-201ENST00000438336 674 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AC117522.1-201ENST00000509821 380 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.12□□□□□ -1.91
CTAGE9A4FU28 Y_RNA.704-201ENST00000516851 102 ntBASIC3.12□□□□□ -1.91
CTAGE9A4FU28 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms