Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AC090115.3-201ENST00000553218 849 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 MIR15A-201ENST00000607334 83 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 U3.45-201ENST00000607547 219 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC084757.4-201ENST00000616350 526 ntBASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PTPDC1A2A3K4 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC007685.1-201ENST00000329806 452 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 RNU6-254P-201ENST00000363377 107 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 RNA5SP387-201ENST00000364226 106 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AL133412.1-201ENST00000380194 2992 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 BX842559.1-201ENST00000419615 532 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 TXNP1-201ENST00000441872 371 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC007677.1-201ENST00000445757 515 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 PRSS3P4-201ENST00000453323 162 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 RPL37P6-201ENST00000460682 294 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AP000926.1-201ENST00000479573 241 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC078918.1-201ENST00000498515 228 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AL359273.1-201ENST00000510918 627 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 MIR3922-201ENST00000585192 84 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC002545.1-201ENST00000592511 181 ntBASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PTPDC1A2A3K4 AC007656.2-201ENST00000624902 4547 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-1252P-201ENST00000363054 104 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AL139397.2-201ENST00000404529 772 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC002075.2-201ENST00000425207 252 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC236972.2-201ENST00000434979 310 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RPL7P28-201ENST00000437739 740 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 Y_RNA.632-201ENST00000459189 102 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 SNORA31.8-201ENST00000516327 108 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 Y_RNA.682-201ENST00000516457 100 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-256P-201ENST00000516747 97 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-914P-201ENST00000516749 109 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-1153P-201ENST00000516760 105 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-1088P-201ENST00000516850 104 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 RNU6-1073P-201ENST00000517182 106 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 MIR3941-201ENST00000582572 103 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 ATP1B3P1-201ENST00000605365 821 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 AP002826.1-201ENST00000608835 315 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 uc_338.32-201ENST00000615087 172 ntBASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
PTPDC1A2A3K4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 RNA5SP42-201ENST00000364278 115 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 MIR1290-201ENST00000408735 78 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 RPLP0P7-201ENST00000416050 667 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 CYP4F29P-201ENST00000420685 446 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 RPS29P31-201ENST00000446147 164 ntBASIC4.24□□□□□ -1.73
PTPDC1A2A3K4 RPL7P43-201ENST00000478876 753 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms