Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHISA3A0PJX4 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 snoU2_19.2-201ENST00000363024 80 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SNORA74A-201ENST00000364089 198 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 RNU6-336P-201ENST00000364891 107 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 RNA5SP428-201ENST00000365129 132 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SNORA70-201ENST00000384436 135 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 BTF3L4P2-201ENST00000392798 346 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AP000275.1-201ENST00000411943 390 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 RPL23AP22-201ENST00000437556 453 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AL139109.1-201ENST00000455491 297 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 RN7SL172P-201ENST00000460535 303 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC139453.3-201ENST00000493276 369 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AL671862.1-201ENST00000515851 349 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SNORA31.8-201ENST00000516327 108 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SNORA70.16-201ENST00000516390 95 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC007458.1-201ENST00000542812 373 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AL137100.2-201ENST00000555786 315 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 MIR5699-201ENST00000578903 90 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 BX284668.6-201ENST00000606899 438 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC015813.4-201ENST00000610469 179 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC131238.1-201ENST00000617135 328 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 AC099506.2-201ENST00000623074 221 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 LINC01355-201ENST00000566551 5444 ntBASIC4.09□□□□□ -1.75
SHISA3A0PJX4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
SHISA3A0PJX4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 AC008568.2-201ENST00000623862 2313 ntBASIC4.09□□□□□ -1.76
SHISA3A0PJX4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.09□□□□□ -1.76
SHISA3A0PJX4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC139713.2-215ENST00000641428 5037 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 SNURFL-201ENST00000309296 343 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RNU6-78P-201ENST00000362897 107 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.180-201ENST00000363867 113 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RNU6-280P-201ENST00000364145 104 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 Y_RNA.462-201ENST00000384268 102 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 MIR215-201ENST00000384858 110 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RNA5SP36-201ENST00000410197 133 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 TOMM22P1-201ENST00000418578 312 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RPL17P36-201ENST00000420302 549 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 Z82210.1-201ENST00000440037 231 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RNU7-87P-201ENST00000459343 62 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC034236.1-201ENST00000469891 373 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RPL23AP65-201ENST00000475608 468 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 RN7SKP260-201ENST00000516907 149 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 SNORA31.18-201ENST00000517043 134 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC136932.1-201ENST00000574771 208 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC130289.1-201ENST00000577321 73 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 MIR4691-201ENST00000583764 85 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC060766.3-201ENST00000591442 263 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC137590.2-201ENST00000619709 240 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 AC000123.3-201ENST00000624029 4975 ntBASIC4.08□□□□□ -1.76
SHISA3A0PJX4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
SHISA3A0PJX4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms