Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
CCDC163A0A0D9SF12 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 SNORA60-201ENST00000362396 134 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-37P-201ENST00000362692 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-11P-201ENST00000364234 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-7-201ENST00000364784 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-8-201ENST00000365467 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 XGY1-201ENST00000381172 446 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-25P-201ENST00000383873 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-1-201ENST00000383898 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-48P-201ENST00000384161 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-36P-201ENST00000384172 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-4P-201ENST00000384205 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-5P-201ENST00000384238 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-3P-201ENST00000384314 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-16P-201ENST00000384385 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-15P-201ENST00000384534 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-2-201ENST00000384627 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-29P-201ENST00000384637 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-9-201ENST00000384776 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-33P-201ENST00000384793 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.579-201ENST00000390939 94 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AL592291.1-201ENST00000403830 352 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AL391417.1-201ENST00000404100 426 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RPL36AP10-201ENST00000421785 322 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 GOT2P5-201ENST00000433995 546 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RPS26P2-201ENST00000440331 348 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 NOTCH2P1-201ENST00000443481 624 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 MRPS31P2-201ENST00000451581 518 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RPL30P15-201ENST00000457129 321 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 snoU109.2-201ENST00000459316 135 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC026801.1-201ENST00000497178 464 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.718-201ENST00000517110 102 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU1-54P-201ENST00000517181 120 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 TRMT10BP1-201ENST00000519377 943 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AP005597.4-201ENST00000526762 229 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 CBX3P7-201ENST00000532876 502 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC110741.2-201ENST00000605278 268 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-6P-201ENST00000606623 107 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC068831.7-201ENST00000616954 363 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AC002076.2-201ENST00000617362 122 ntBASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC163A0A0D9SF12 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 Y_RNA.135-201ENST00000363439 95 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-213P-201ENST00000384051 104 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AL445529.1-201ENST00000398713 389 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 MIR1179-201ENST00000408703 91 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC093151.1-201ENST00000427711 313 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 SAR1AP4-201ENST00000429225 591 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AL158071.1-201ENST00000430315 461 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC092798.1-201ENST00000458542 409 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC084357.1-201ENST00000473404 255 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 RPL7P47-201ENST00000497299 556 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 RNU6-928P-201ENST00000516876 104 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 APOOP3-201ENST00000536787 586 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 MIR4474-201ENST00000579189 78 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 MIR5690-201ENST00000583739 73 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 ELOCP5-201ENST00000604924 333 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC010201.1-201ENST00000605051 540 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC008962.1-201ENST00000605729 304 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 Z98200.1-201ENST00000607298 470 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AC015871.5-202ENST00000623252 701 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 ZNF807-201ENST00000328088 1707 ntBASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC163A0A0D9SF12 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC090740.1-201ENST00000623193 2262 ntBASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC163A0A0D9SF12 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms