Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 ZNF90P2-204ENST00000419323 1075 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 RPL35AP22-201ENST00000436855 335 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 MTND4P6-201ENST00000438297 472 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 MTATP6P30-201ENST00000443540 664 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 RN7SL274P-201ENST00000492268 272 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC008526.1-201ENST00000509149 338 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 NACAP3-201ENST00000552100 481 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 OR11H5P-201ENST00000554039 926 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL136520.1-202ENST00000555494 763 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL357094.1-201ENST00000603845 844 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC004908.2-201ENST00000609090 574 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC107075.1-201ENST00000613695 314 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 TUG1_2.1-201ENST00000614234 87 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC024581.2-201ENST00000619986 252 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC104985.3-201ENST00000623479 597 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC019226.1-201ENST00000625666 515 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AC103710.2-202ENST00000641454 2853 ntBASIC1.44□□□□□ -2.18
TRAV41A0A0B4J266 AL356292.1-201ENST00000283110 373 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-778P-201ENST00000363269 103 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 MIR147B-201ENST00000390185 80 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 U8.13-201ENST00000390842 128 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 Y_RNA.578-201ENST00000390903 88 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-754P-201ENST00000391166 107 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL139397.2-201ENST00000404529 772 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 XKRYP1-201ENST00000423438 492 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 XKRYP2-201ENST00000432915 492 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 SNRPEP9-201ENST00000436794 238 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL353689.1-201ENST00000438895 199 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC003989.2-201ENST00000440224 169 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RPL23AP3-201ENST00000453844 468 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RPL21P99-201ENST00000480369 423 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RPL23AP63-201ENST00000498752 471 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC091965.2-201ENST00000512324 613 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-150P-201ENST00000516237 95 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 RNU2-44P-201ENST00000516795 194 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 SNORD19.2-201ENST00000516978 73 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 CBX3P7-201ENST00000532876 502 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC024619.4-201ENST00000580924 316 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 UBE2L4-201ENST00000587688 464 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC005261.5-201ENST00000596280 355 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC021171.1-201ENST00000603137 706 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 MTATP6P2-201ENST00000603319 678 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC012493.3-201ENST00000604494 112 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC004805.2-201ENST00000605382 482 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL158211.2-201ENST00000607282 395 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC239868.4-201ENST00000608318 671 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 uc_338.14-201ENST00000613162 166 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AL158801.5-201ENST00000623123 465 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC007490.1-201ENST00000624321 703 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC099063.3-201ENST00000642066 185 ntBASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV41A0A0B4J266 AP006437.1-201ENST00000641440 3685 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL161781.1-201ENST00000354277 403 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-486P-201ENST00000363116 107 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL590084.2-201ENST00000401481 382 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 SUMO2P12-201ENST00000405924 140 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 CCNG1P1-201ENST00000406783 885 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RNU6-516P-201ENST00000411381 104 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 EDDM3CP-201ENST00000415977 425 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RPS24P7-201ENST00000416921 246 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 MTND1P28-201ENST00000435623 950 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 CECR9-201ENST00000453421 199 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 RPL23AP41-201ENST00000484754 458 ntBASIC1.42□□□□□ -2.18
TRAV41A0A0B4J266 AC104564.1-201ENST00000493028 407 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms