Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC008162.1-201ENST00000604718 254 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL670379.1-201ENST00000604752 252 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AP000860.1-201ENST00000605250 559 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL670379.5-201ENST00000605253 252 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL670379.12-201ENST00000605291 253 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL670379.8-201ENST00000605353 252 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AC004805.2-201ENST00000605382 482 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL670379.7-201ENST00000605823 252 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AL603839.4-201ENST00000624658 1005 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 AC008264.2-201ENST00000610193 3731 ntBASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
PCDHGA1Q9Y5H4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC073325.2-201ENST00000339545 159 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 U3.4-201ENST00000363352 213 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RNU6-511P-201ENST00000363496 107 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 SNORA9.2-201ENST00000365361 133 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AL139397.2-201ENST00000404529 772 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RNU2-68P-201ENST00000410878 191 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RPL26P27-201ENST00000414397 437 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 MTND1P28-201ENST00000435623 950 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RPL23AP20-201ENST00000447965 421 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RPL37P4-201ENST00000448908 268 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC108938.1-201ENST00000451204 136 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 RPL12P25-201ENST00000455592 494 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC128713.1-201ENST00000471495 306 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 SUMO2P6-201ENST00000505273 288 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 SNORA31.3-201ENST00000516029 96 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AL359212.1-201ENST00000556608 614 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 HMGN2P15-201ENST00000585707 270 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 HMGN1P30-201ENST00000589286 268 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 BNIP3P8-201ENST00000597863 560 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC024153.1-201ENST00000603103 365 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 DPPA3P3-201ENST00000603842 430 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC068276.1-201ENST00000605793 379 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC025594.3-201ENST00000613068 790 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AC006338.1-201ENST00000618453 749 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 AL137003.2-201ENST00000606924 2538 ntBASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHGA1Q9Y5H4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 MRPL42P2-201ENST00000403169 426 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 NDUFS5P1-201ENST00000405668 289 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL589872.1-201ENST00000426602 288 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC104651.1-201ENST00000427559 735 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 GTF2IP20-201ENST00000431663 360 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 GPM6BP2-201ENST00000432046 144 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 RPS15AP5-201ENST00000436276 388 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL513043.1-201ENST00000439124 535 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC098831.1-201ENST00000440661 216 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 GPM6BP1-201ENST00000446387 144 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 SNRPGP9-201ENST00000456025 225 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 RBM43P1-201ENST00000476891 1081 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC114781.4-201ENST00000513707 639 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC022447.1-201ENST00000515358 464 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 SCARNA20.6-201ENST00000517251 106 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AP006587.4-201ENST00000526053 529 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 ARL2BPP2-201ENST00000550907 489 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC010546.1-201ENST00000569391 485 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL590229.1-201ENST00000603497 542 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC007619.2-201ENST00000605743 379 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL161734.1-201ENST00000609720 557 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL591516.1-201ENST00000611326 274 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC013562.2-201ENST00000611632 603 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 DUSP12P1-201ENST00000612874 516 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AC108479.2-201ENST00000617314 601 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 AL359757.2-201ENST00000624309 274 ntBASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA1Q9Y5H4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PCDHGA1Q9Y5H4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
PCDHGA1Q9Y5H4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms