Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ATP5JP1-201ENST00000431631 322 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC016696.1-201ENST00000446949 318 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC108059.3-201ENST00000456388 214 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AL162395.1-201ENST00000457882 422 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-333P-201ENST00000459117 107 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGN1P13-201ENST00000505795 138 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 HMGB3P15-201ENST00000507326 574 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORA70.19-201ENST00000516717 90 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC087241.2-201ENST00000535801 324 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 CYCSP30-201ENST00000546447 172 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 TRAV37-201ENST00000553906 342 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AL118558.2-201ENST00000556294 238 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC024619.4-201ENST00000580924 316 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR5583-1-201ENST00000580941 59 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR4424-201ENST00000585257 86 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC006077.1-201ENST00000604746 343 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 IGHV3-29-201ENST00000604817 344 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 AL133216.2-202ENST00000634512 349 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR1302-1-201ENST00000637932 143 ntBASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDHGB1Q9Y5G3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AL161912.2-201ENST00000565707 3007 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORD56.3-201ENST00000363507 71 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-263P-201ENST00000363811 107 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-188P-201ENST00000364207 107 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 SNORA32.2-201ENST00000384049 122 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-831P-201ENST00000384548 107 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR30B-201ENST00000384850 88 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 SOD2P1-201ENST00000396543 562 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNA5SP56-201ENST00000410277 118 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 MTND3P8-201ENST00000412909 339 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL23AP82-202ENST00000427528 469 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005094.1-201ENST00000440420 368 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 MTCYBP6-201ENST00000441810 138 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RN7SL594P-201ENST00000470590 287 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC126389.1-201ENST00000477436 290 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC135721.1-201ENST00000497954 479 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU4-29P-201ENST00000515943 174 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU4-49P-201ENST00000516080 140 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC026403.1-201ENST00000518938 295 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC011611.1-201ENST00000552179 197 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AL163153.1-201ENST00000554223 283 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 RPL21P12-201ENST00000559810 515 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC004908.2-201ENST00000609090 574 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC064836.2-201ENST00000609491 462 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC090574.1-201ENST00000623186 233 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 AP001350.1-201ENST00000601906 1524 ntBASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDHGB1Q9Y5G3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 RNU6-213P-201ENST00000384051 104 ntBASIC3.22□□□□□ -1.89
PCDHGB1Q9Y5G3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms