Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 Z82210.1-201ENST00000440037 231 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC013470.1-201ENST00000453438 462 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 snoU13.20-201ENST00000459180 104 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC078918.1-201ENST00000498515 228 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC140172.1-201ENST00000502928 141 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC109479.2-201ENST00000517842 174 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AP000827.1-201ENST00000527814 258 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC090517.1-201ENST00000569307 266 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AL139395.1-201ENST00000603662 160 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 AC009318.2-201ENST00000610917 651 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 U6.99-201ENST00000637524 83 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
SF3B6Q9Y3B4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 INTS6P1-201ENST00000504674 2530 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-806P-201ENST00000365147 105 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RNU5E-7P-201ENST00000365290 117 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.461-201ENST00000384263 103 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 MIR493-201ENST00000385254 89 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 SAR1AP2-201ENST00000392696 594 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-847P-201ENST00000411115 108 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RBMY1KP-201ENST00000423480 476 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AL772161.1-201ENST00000439130 476 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-377P-201ENST00000515965 102 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC005476.1-201ENST00000554427 397 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC023575.1-201ENST00000580510 358 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 MIR4691-201ENST00000583764 85 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC005357.1-201ENST00000588399 301 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC010201.1-201ENST00000605051 540 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC064801.1-201ENST00000612025 407 ntBASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SF3B6Q9Y3B4 AC233263.6-201ENST00000631132 1963 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.64-201ENST00000362845 102 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RN7SKP115-201ENST00000363177 317 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RNA5SP123-201ENST00000363244 119 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 Y_RNA.288-201ENST00000364854 92 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 MIR628-201ENST00000385229 95 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 MT-TW-201ENST00000387382 68 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 SNORA69.1-201ENST00000390904 137 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AL358472.1-201ENST00000431295 329 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 HLA-N-201ENST00000437516 135 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RPL12P3-201ENST00000440080 396 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC079354.2-201ENST00000453523 154 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RPS29P27-201ENST00000463711 170 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC006499.6-201ENST00000511169 607 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RNU6-408P-201ENST00000515910 100 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 SNORA25.11-201ENST00000515935 105 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 RNA5SP154-201ENST00000516193 111 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC022726.1-201ENST00000587475 207 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC006557.5-201ENST00000603126 811 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC005046.1-201ENST00000608515 625 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AL731566.2-201ENST00000618971 317 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AL159153.1-201ENST00000619688 317 ntBASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
SF3B6Q9Y3B4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.09□□□□□ -1.76
SF3B6Q9Y3B4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.76
SF3B6Q9Y3B4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 152.1 ms