Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC023141.11-201ENST00000508864 202 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-1183P-201ENST00000517054 60 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC007954.1-201ENST00000554198 494 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 ZNF519P3-201ENST00000557158 1032 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 ROCK1P1-201ENST00000573767 549 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MIR3199-1-201ENST00000582434 88 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC234772.3-201ENST00000602277 528 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 BNIP3P9-201ENST00000603714 553 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC104763.2-201ENST00000604179 382 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC121334.2-201ENST00000605387 271 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AL365204.3-201ENST00000612448 685 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 AC010678.1-201ENST00000614118 713 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 CU459211.1-201ENST00000635667 749 ntBASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KCNIP3Q9Y2W7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MTND4P35-201ENST00000604257 1375 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MTND5P30-201ENST00000452896 1731 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-288P-201ENST00000363690 104 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 RNY4P16-201ENST00000364768 94 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 RNU5E-6P-201ENST00000365574 115 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MIR524-201ENST00000385242 87 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 USP9YP6-201ENST00000413550 854 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC006366.1-201ENST00000422002 759 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC019097.1-201ENST00000424783 735 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL008629.1-201ENST00000438615 184 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC104978.1-201ENST00000449387 391 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 CACYBPP2-201ENST00000453625 678 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-1092P-201ENST00000516955 87 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 SCARNA3-201ENST00000517097 143 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC009902.1-201ENST00000519351 183 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL121821.2-201ENST00000556081 394 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 PCMTD1P2-201ENST00000565017 355 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MIR3167-201ENST00000579623 85 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 uc_338.14-201ENST00000613162 166 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL449363.1-201ENST00000617815 186 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL589994.2-201ENST00000621124 579 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC091953.2-201ENST00000623979 160 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC010149.2-201ENST00000637608 315 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 AC006927.3-201ENST00000638789 384 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
KCNIP3Q9Y2W7 CDC27P3-201ENST00000635418 1910 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-501P-201ENST00000364072 100 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 RNA5SP479-201ENST00000364858 117 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 Z98749.2-208ENST00000381646 500 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 Y_RNA.534-201ENST00000384599 112 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 OR51A5P-201ENST00000415429 942 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 PTGES3P4-201ENST00000426243 356 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 RPL22P17-201ENST00000438729 315 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 MTND4P25-201ENST00000441039 533 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 LINC00888-204ENST00000487386 421 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC112204.1-201ENST00000502591 103 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 RNA5SP282-201ENST00000516355 108 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 RNU6-143P-201ENST00000516942 93 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 CKS1BP7-201ENST00000522230 235 ntBASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.11□□□□□ -2.07
KCNIP3Q9Y2W7 MTND4LP18-201ENST00000526864 291 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms