Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SNORD115-7-201ENST00000365306 82 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MIR514A2-201ENST00000385131 88 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MIR514A3-201ENST00000385132 88 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 ARL5AP1-201ENST00000418991 388 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MTCO3P46-201ENST00000425787 232 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 CALM2P2-201ENST00000428512 440 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AMD1P1-201ENST00000457220 922 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 HMGN2P26-201ENST00000463169 339 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC108078.2-201ENST00000510750 236 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 PSMA2P1-201ENST00000526365 646 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC007458.1-201ENST00000542812 373 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC078814.3-201ENST00000553036 491 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 MIR4425-201ENST00000580572 84 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 VN1R80P-201ENST00000597126 338 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-89P-201ENST00000606519 100 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC093913.1-201ENST00000614178 329 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC009233.1-201ENST00000616477 371 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AL353748.2-201ENST00000622148 471 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 AC007998.5-201ENST00000622938 237 ntBASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX2IPQ9Y2D8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-1287P-201ENST00000362914 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-66P-201ENST00000365199 138 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.356-201ENST00000365475 113 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-946P-201ENST00000383878 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-76P-201ENST00000384060 104 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-38P-201ENST00000384085 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-1060P-201ENST00000384664 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 MIR184-201ENST00000384962 84 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 HSPE1P8-201ENST00000406997 288 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RN7SKP32-201ENST00000410167 303 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU4-26P-201ENST00000410270 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AL365400.1-201ENST00000431854 640 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RPS29P31-201ENST00000446147 164 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AL118520.1-201ENST00000450770 291 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC092001.1-201ENST00000453012 261 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AL162395.1-201ENST00000457882 422 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-333P-201ENST00000459117 107 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC007547.1-201ENST00000462177 490 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 RPL21P99-201ENST00000480369 423 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 TRBV12-2-201ENST00000489763 344 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 VN1R104P-201ENST00000505115 1009 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC104806.1-201ENST00000508720 308 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AP004371.1-201ENST00000525240 214 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 OR5D17P-201ENST00000531492 978 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC012182.1-201ENST00000570133 895 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 MIR3200-201ENST00000580767 85 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC174048.1-201ENST00000603389 144 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC004696.1-201ENST00000614345 607 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AL589994.2-201ENST00000621124 579 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC090617.10-201ENST00000624308 134 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 MIR7153-201ENST00000637758 57 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC004925.1-201ENST00000624256 2706 ntBASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX2IPQ9Y2D8 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC103710.2-202ENST00000641454 2853 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.100-201ENST00000363141 102 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 SNORD81.2-201ENST00000365153 76 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 SMIM11P1-201ENST00000369586 178 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 RNU6-701P-201ENST00000384059 107 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 Y_RNA.576-201ENST00000384781 102 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 MIR490-201ENST00000384865 128 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 NDUFS5P1-201ENST00000405668 289 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC093106.2-201ENST00000428212 385 ntBASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.81□□□□□ -1.8
SSX2IPQ9Y2D8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms