Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 MRPL48P1-201ENST00000445390 636 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 EEF1B2P7-201ENST00000451177 676 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC011276.1-201ENST00000469688 323 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC091144.1-201ENST00000519573 138 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 BRDTP1-201ENST00000605735 677 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 HSPE1P14-201ENST00000605812 302 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC073349.3-201ENST00000617616 186 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 CDRT1-208ENST00000630868 794 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC107068.1-201ENST00000563286 4218 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 AC092079.1-201ENST00000558620 1985 ntBASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
PDZRN3Q9UPQ7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AC010300.1-201ENST00000600671 5134 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 SNORA20-201ENST00000384662 132 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 SNORD96B-201ENST00000386148 79 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AL139039.1-201ENST00000401900 692 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SKP284-201ENST00000411002 343 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 RPS4XP22-201ENST00000480755 780 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 RN7SKP46-201ENST00000515942 234 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 RNU6-589P-201ENST00000516485 107 ntBASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDZRN3Q9UPQ7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.45
PDZRN3Q9UPQ7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.96□□□□□ -1.45
PDZRN3Q9UPQ7 TLK1P1-201ENST00000456760 2440 ntBASIC5.96□□□□□ -1.45
PDZRN3Q9UPQ7 AC093535.2-201ENST00000624769 2326 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 XIAPP3-201ENST00000312918 795 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNA5SP515-201ENST00000364570 118 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-312P-201ENST00000364629 107 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 SNORD63-201ENST00000384262 68 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 MIR649-201ENST00000384843 97 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-1275P-201ENST00000391087 107 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AL023807.1-201ENST00000407932 359 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-325P-201ENST00000411132 105 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNA5SP107-201ENST00000411358 122 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNA5SP111-201ENST00000411386 101 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC011742.1-201ENST00000431448 434 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RPS26P40-201ENST00000435209 294 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 SEPT7P4-201ENST00000437076 306 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 CYCSP43-201ENST00000438233 310 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AL139099.1-201ENST00000497398 403 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC005840.1-201ENST00000498412 377 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RN7SL652P-201ENST00000577769 300 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 MIR5696-201ENST00000578474 85 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC007566.2-201ENST00000603642 413 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AP005019.3-201ENST00000620418 560 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 AC104260.2-201ENST00000623551 3497 ntBASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
PDZRN3Q9UPQ7 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 AC093591.2-201ENST00000565254 3843 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 NCAPGP1-201ENST00000505112 1814 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 PHKBP1-201ENST00000450951 1951 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 AL022322.2-201ENST00000624072 20397 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 UBE2WP1-201ENST00000362030 340 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 Y_RNA.286-201ENST00000364813 102 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 U8.8-201ENST00000365399 135 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-946P-201ENST00000383878 107 ntBASIC5.95□□□□□ -1.46
PDZRN3Q9UPQ7 RNU6-1144P-201ENST00000384247 104 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms