Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RNU6-82P-201ENST00000363970 107 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 RNU6-169P-201ENST00000365336 107 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 Y_RNA.530-201ENST00000384587 101 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 REREP1Y-201ENST00000422655 198 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 REREP2Y-201ENST00000439103 200 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 RPS7P5-201ENST00000441482 581 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 OSTCP8-201ENST00000445117 448 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 RNU7-27P-201ENST00000459281 62 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AC021205.1-201ENST00000468797 348 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 RPS27P27-201ENST00000498779 255 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 HSPE1P3-201ENST00000559254 309 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 HMGB3P26-201ENST00000560051 582 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AC006023.1-201ENST00000603944 259 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AC004805.2-201ENST00000605382 482 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 Z82243.1-201ENST00000609432 473 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AL021879.1-201ENST00000611756 288 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 AC091903.1-201ENST00000624322 454 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 IPO8P1-201ENST00000455509 3109 ntBASIC2.71□□□□□ -1.97
NOTCH3Q9UM47 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC025125.1-201ENST00000624743 1922 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RNA5SP374-201ENST00000362939 125 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.473-201ENST00000384333 102 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 MIR454-201ENST00000390180 115 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 UBA52P6-201ENST00000399822 382 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AL356421.1-201ENST00000403255 413 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 HMGB1P17-201ENST00000403495 628 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RN7SKP158-201ENST00000410453 326 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RNU2-23P-201ENST00000410545 195 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RN7SKP53-201ENST00000411337 315 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RPL21P2-201ENST00000440049 481 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AL162388.1-201ENST00000450912 352 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 EIF4A1P11-201ENST00000451239 222 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 BX276092.4-201ENST00000452056 248 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC133473.1-201ENST00000455173 299 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RPS20P32-201ENST00000456044 356 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 RPS15AP17-201ENST00000470598 390 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC109925.1-201ENST00000478069 331 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC034222.1-201ENST00000494052 532 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC090453.1-201ENST00000495560 436 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC026784.1-201ENST00000507986 352 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.721-201ENST00000517207 102 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC087854.1-201ENST00000519706 414 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 MIR4790-201ENST00000577799 79 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AF038458.1-201ENST00000588406 262 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 AC092125.1-201ENST00000562568 1995 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 PNPT1P2-201ENST00000456768 2050 ntBASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC2.71□□□□□ -1.98
NOTCH3Q9UM47 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL512646.1-201ENST00000269395 1077 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 FTLP6-201ENST00000355274 422 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-1115P-201ENST00000362490 106 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-552P-201ENST00000362869 119 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 SNORD3E-201ENST00000362899 217 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.167-201ENST00000363735 109 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-853P-201ENST00000364306 107 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU6-593P-201ENST00000364716 112 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 Y_RNA.556-201ENST00000384677 113 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 EIF5P1-201ENST00000400019 1231 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNA5SP293-201ENST00000410527 113 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 BX842559.1-201ENST00000419615 532 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC025750.2-201ENST00000442609 450 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC020550.1-201ENST00000447385 163 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AP1S2P1-201ENST00000457344 379 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC018797.3-201ENST00000513388 1241 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 RNU2-27P-201ENST00000516185 142 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MYL12AP1-201ENST00000518490 515 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 MIR4424-201ENST00000585257 86 ntBASIC2.7□□□□□ -1.98
NOTCH3Q9UM47 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms