Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL390208.1-201ENST00000605885 644 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC068944.2-201ENST00000610373 403 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC022202.1-201ENST00000613515 211 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 U2.21-201ENST00000637295 81 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 MIR1322-201ENST00000638013 71 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 ADAM3A-203ENST00000461344 2157 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 UBE2L2-201ENST00000254302 429 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 RNU6-28P-201ENST00000362378 107 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 Y_RNA.25-201ENST00000362528 102 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 DHFRP6-201ENST00000401776 268 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 RPL26P27-201ENST00000414397 437 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AL158823.1-201ENST00000418441 478 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 HMGN2P3-201ENST00000433603 273 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AL512661.1-201ENST00000434586 1253 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 HMGN2P5-201ENST00000436882 273 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AP001324.2-201ENST00000461163 319 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC055855.1-201ENST00000489563 579 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 RNU6-1102P-201ENST00000516149 96 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 RNU6-1261P-201ENST00000517194 104 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC023632.1-201ENST00000518463 375 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 MIR3167-201ENST00000579623 85 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC011494.1-201ENST00000596454 237 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC091152.3-201ENST00000604227 325 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC004805.2-201ENST00000605382 482 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC106052.1-201ENST00000608029 497 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AC091834.1-201ENST00000614543 472 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 AL390862.1-201ENST00000635467 1469 ntBASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.54□□□□□ -2.16
VPS29Q9UBQ0 SNRPEP3-201ENST00000338402 276 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 RNU6-637P-201ENST00000384050 107 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 SNORA26.9-201ENST00000391322 122 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AL627390.1-201ENST00000396055 340 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 NDUFS5P1-201ENST00000405668 289 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 RNU6-516P-201ENST00000411381 104 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AL358453.1-201ENST00000422522 250 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 MTCO2P5-201ENST00000422621 426 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC093155.1-201ENST00000440164 826 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AL161651.1-201ENST00000440882 223 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC006026.1-201ENST00000444025 1803 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 MOB1AP2-201ENST00000446060 614 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 HMGB1P35-201ENST00000503360 598 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 SMURF2P1-201ENST00000514992 481 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 SNORA25.15-201ENST00000516487 89 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC006199.1-201ENST00000548728 219 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC233702.2-202ENST00000562547 291 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC138915.2-201ENST00000569776 97 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 MIR3945-201ENST00000581853 98 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 MTCYBP22-201ENST00000603788 447 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 AL773524.1-201ENST00000614065 229 ntBASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.16
VPS29Q9UBQ0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 MTND4P23-201ENST00000447723 1363 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 Y_RNA.234-201ENST00000364409 97 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 RNU6-1078P-201ENST00000364522 103 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 U6.112-201ENST00000384129 70 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL161449.1-201ENST00000414531 1199 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC244636.1-201ENST00000421152 228 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 BX510359.4-201ENST00000423750 193 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 PTGES3P1-201ENST00000439531 483 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 MTND6P13-201ENST00000443510 523 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC007677.1-201ENST00000445757 515 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AL513124.1-201ENST00000450410 614 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 SSXP1-201ENST00000453640 473 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 snoU13.8-201ENST00000458890 104 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 snoU13.15-201ENST00000459407 104 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC005410.1-202ENST00000460347 485 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 BZW1P2-201ENST00000473537 826 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 AC092902.1-201ENST00000486999 259 ntBASIC1.52□□□□□ -2.17
VPS29Q9UBQ0 CKS1BP2-201ENST00000497342 240 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms