Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC004263.1-201ENST00000479327 332 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC112204.1-201ENST00000502591 103 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC234781.5-201ENST00000508429 271 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 TBCAP3-201ENST00000512475 312 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC123904.2-201ENST00000548059 300 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC025281.1-201ENST00000567026 265 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC012435.1-202ENST00000568772 240 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MIR3670-2-201ENST00000582974 65 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MIR3670-1-201ENST00000584160 65 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC090616.2-202ENST00000584248 222 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MIR3670-3-201ENST00000584855 65 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 HMGN2P15-201ENST00000585707 270 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AP001981.2-201ENST00000603241 418 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MTND4LP5-201ENST00000605152 292 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC004805.2-201ENST00000605382 482 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 BX664608.1-201ENST00000610519 487 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MIR3670-4-201ENST00000612260 65 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 MIR7844-201ENST00000616161 122 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 uc_338.12-201ENST00000616344 181 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
CLCF1Q9UBD9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 RNY3P13-201ENST00000365542 102 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 RPS4XP7-201ENST00000406274 780 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 BX682237.1-201ENST00000415016 335 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL358075.3-201ENST00000426289 226 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC010153.1-201ENST00000432862 727 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 RPL32P28-201ENST00000443577 397 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 RPS15AP27-201ENST00000449183 343 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 RPL36AP51-201ENST00000487216 318 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 SNORA31.3-201ENST00000516029 96 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC022634.1-201ENST00000520765 532 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AP002770.2-201ENST00000543613 532 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 MIR4446-201ENST00000578505 67 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL356575.1-201ENST00000603008 283 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL355877.2-201ENST00000603670 358 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC098826.3-201ENST00000603823 466 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL161798.1-201ENST00000604630 131 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC103810.6-201ENST00000606708 136 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC107294.1-201ENST00000609524 467 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC087683.2-201ENST00000611384 326 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 FRG1KP-201ENST00000623592 341 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 AL445523.1-201ENST00000451184 1362 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 CR848007.1-201ENST00000442354 1699 ntBASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
CLCF1Q9UBD9 ELF2P3-201ENST00000445099 1506 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC004944.1-201ENST00000517807 3059 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RNU5F-6P-201ENST00000362979 116 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RNU6-533P-201ENST00000384144 107 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 SNORD115.1-201ENST00000391109 76 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AL513477.1-202ENST00000417061 214 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 RPL7P37-201ENST00000425095 738 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC098614.2-201ENST00000426040 255 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC104651.1-201ENST00000427559 735 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 MTND5P25-201ENST00000430499 799 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 GPM6BP2-201ENST00000432046 144 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 GPM6BP1-201ENST00000446387 144 ntBASIC2.17□□□□□ -2.06
CLCF1Q9UBD9 CECR9-201ENST00000453421 199 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms