Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 HMGN2P16-201ENST00000456802 261 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 RPS23P3-201ENST00000470993 430 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC091885.1-201ENST00000506658 268 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 SNORA70.19-201ENST00000516717 90 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC015917.1-201ENST00000579654 510 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 AC110741.2-201ENST00000605278 268 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.78□□□□□ -1.8
COL20A1Q9P218 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COL20A1Q9P218 RIOK3P1-201ENST00000418778 1528 ntBASIC3.78□□□□□ -1.8
COL20A1Q9P218 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.78□□□□□ -1.81
COL20A1Q9P218 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.78□□□□□ -1.81
COL20A1Q9P218 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
COL20A1Q9P218 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL20A1Q9P218 RNU6-550P-201ENST00000391057 101 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 RNU6-1197P-201ENST00000391183 107 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 Z85995.1-201ENST00000415547 335 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AL118520.1-201ENST00000450770 291 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 ELOCP23-201ENST00000452014 332 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 RPS15AP34-201ENST00000487776 387 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 RPL30P5-201ENST00000494923 336 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 RBBP4P6-201ENST00000508098 202 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC074344.1-201ENST00000512823 224 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 APOOP4-201ENST00000513530 597 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 AF235103.2-201ENST00000525753 346 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 MIR5004-201ENST00000579078 107 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 MIR548S-201ENST00000581352 82 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC060780.3-201ENST00000589464 80 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC013553.2-201ENST00000604244 589 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AL110115.1-201ENST00000614396 364 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 AC244205.2-202ENST00000635781 342 ntBASIC3.77□□□□□ -1.81
COL20A1Q9P218 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
COL20A1Q9P218 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
COL20A1Q9P218 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC007785.2-201ENST00000598627 1916 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 Y_RNA.88-201ENST00000363029 99 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 RNU6-525P-201ENST00000363685 104 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 RNU2-33P-201ENST00000410344 192 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 ARL5AP1-201ENST00000418991 388 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AL591704.1-201ENST00000432574 275 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 MTND3P10-201ENST00000450967 341 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC069439.1-201ENST00000494739 167 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AP001086.1-201ENST00000494882 321 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 EIF4EP3-201ENST00000498782 656 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 SUB1P1-201ENST00000524415 382 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 ZNF192P1-203ENST00000565888 810 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 MIR4644-201ENST00000579929 84 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC098826.3-201ENST00000603823 466 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AL008636.1-201ENST00000625038 1018 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 MTND1P37-201ENST00000636562 264 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 AC024614.3-201ENST00000637860 256 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 CEP170P1-201ENST00000502249 4587 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 OR4G1P-203ENST00000641984 1631 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 AL354685.2-201ENST00000448218 1447 ntBASIC3.76□□□□□ -1.81
COL20A1Q9P218 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
COL20A1Q9P218 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
COL20A1Q9P218 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 ASNSP3-201ENST00000451989 1306 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
COL20A1Q9P218 Y_RNA.157-201ENST00000363638 102 ntBASIC3.75□□□□□ -1.81
COL20A1Q9P218 RNU6-116P-201ENST00000384042 109 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms