Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-914P-201ENST00000516749 109 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC060788.1-201ENST00000521318 469 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC087883.1-201ENST00000551882 391 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AL137843.1-201ENST00000605078 385 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC091953.5-201ENST00000622919 233 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC010889.1-201ENST00000566193 2666 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA9.2-201ENST00000365361 133 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-641P-201ENST00000384006 107 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL451074.5-201ENST00000415894 435 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL513043.1-201ENST00000439124 535 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 HMGN2P10-201ENST00000448085 265 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC109927.2-201ENST00000506416 303 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-56P-201ENST00000516986 93 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC022616.3-201ENST00000523940 148 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 GLYCAM1-201ENST00000546596 285 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC021739.1-201ENST00000559631 174 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 MIR4782-201ENST00000577987 79 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 MIR3200-201ENST00000580767 85 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL161756.2-201ENST00000604597 246 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL139286.2-201ENST00000606838 396 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AL161734.1-201ENST00000609720 557 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC073114.1-201ENST00000612027 490 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC110994.2-201ENST00000635481 492 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 U6.99-201ENST00000637524 83 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AC096644.4-201ENST00000563417 2912 ntBASIC3.22□□□□□ -1.89
BLOC1S4Q9NUP1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.89
BLOC1S4Q9NUP1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA68.1-201ENST00000364537 132 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-395P-201ENST00000365662 106 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 MIR181B1-201ENST00000385240 110 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 RPL5P18-201ENST00000406671 891 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-387P-201ENST00000411331 105 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 MTND1P26-201ENST00000440488 538 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 RPS27AP8-201ENST00000452665 445 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 ADI1P3-201ENST00000549509 470 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 MIR1273C-201ENST00000578669 77 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC024619.4-201ENST00000580924 316 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 CLIC4P2-201ENST00000601934 717 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 SEPT7P9-203ENST00000604116 343 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC109347.2-201ENST00000610220 349 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC130324.3-201ENST00000614165 542 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AL162274.2-201ENST00000614406 332 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC093908.1-201ENST00000623125 8092 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 AC000403.1-201ENST00000613696 3585 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BLOC1S4Q9NUP1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 RNU6-39P-201ENST00000384344 107 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 MIR627-201ENST00000384979 97 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 UBA52P6-201ENST00000399822 382 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.2□□□□□ -1.9
BLOC1S4Q9NUP1 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms