Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC090615.1-201ENST00000577519 154 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 MIR4299-201ENST00000577899 72 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.57□□□□□ -2.16
CISHQ9NSE2 AL391813.1-201ENST00000603098 260 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AP000238.1-201ENST00000608759 426 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC104763.3-201ENST00000613765 618 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC002550.2-201ENST00000621246 394 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 AC116618.1-201ENST00000634617 774 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 MTND4P21-201ENST00000453886 1357 ntBASIC1.57□□□□□ -2.16
CISHQ9NSE2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 ZNF702P-202ENST00000434269 1966 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 RNU5E-8P-201ENST00000363502 116 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 RNU6-174P-201ENST00000410406 106 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC027644.1-201ENST00000419595 298 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 BPY2DP-201ENST00000422208 265 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC096920.1-201ENST00000423991 241 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC007919.1-201ENST00000429380 217 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 SDCBPP1-201ENST00000440192 890 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 RNU6-1261P-201ENST00000517194 104 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC023632.1-201ENST00000518463 375 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC007151.1-201ENST00000572774 483 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC090897.2-201ENST00000581715 130 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC105245.1-201ENST00000581934 244 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC103987.3-201ENST00000582071 292 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC068276.1-201ENST00000605793 379 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AL158211.4-201ENST00000606988 584 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AC004908.2-201ENST00000609090 574 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 AL603758.1-201ENST00000618654 241 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.56□□□□□ -2.16
CISHQ9NSE2 MTND5P30-201ENST00000452896 1731 ntBASIC1.56□□□□□ -2.16
CISHQ9NSE2 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 Y_RNA.25-201ENST00000362528 102 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 U6.112-201ENST00000384129 70 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 U6atac.2-201ENST00000408644 118 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 MTCO2P5-201ENST00000422621 426 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 DEFB130D-201ENST00000426866 237 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 HMGB1P27-201ENST00000431429 603 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 MTCYBP15-201ENST00000433123 1127 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 GTF2IP7-202ENST00000436677 309 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 MTND2P30-201ENST00000456663 382 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AF213884.2-201ENST00000510417 903 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 NRON-201ENST00000517270 370 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AP001189.2-201ENST00000527320 189 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC005034.5-201ENST00000604219 466 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AL355297.2-201ENST00000604792 129 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AL391813.2-201ENST00000609113 322 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC110491.1-201ENST00000562191 2010 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AL356473.1-201ENST00000406203 1408 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 AL354685.2-201ENST00000448218 1447 ntBASIC1.55□□□□□ -2.16
CISHQ9NSE2 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.55□□□□□ -2.16
CISHQ9NSE2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CISHQ9NSE2 RNU6-661P-201ENST00000362409 107 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 RNA5SP276-201ENST00000362580 94 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 USP9YP19-201ENST00000412165 485 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 NDUFS5P4-201ENST00000412983 318 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 EDDM3CP-201ENST00000415977 425 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 BX664727.1-201ENST00000416024 466 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 USP9YP13-201ENST00000417797 480 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC092427.1-201ENST00000439177 601 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 MTND2P3-201ENST00000452458 470 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 RPL12P25-201ENST00000455592 494 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 snoU109.1-201ENST00000459339 135 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC008379.1-201ENST00000463655 464 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 HMGB1P36-201ENST00000487709 576 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC008526.1-201ENST00000509149 338 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC117532.1-201ENST00000514638 323 ntBASIC1.54□□□□□ -2.16
CISHQ9NSE2 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.54□□□□□ -2.16
CISHQ9NSE2 RN7SKP219-201ENST00000516825 296 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms