Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AC026271.5-201ENST00000577873 130 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL391813.1-201ENST00000603098 260 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.6-201ENST00000603753 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.11-201ENST00000604059 253 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.10-201ENST00000604330 253 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 SUMO2P14-201ENST00000604488 293 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AC008162.1-201ENST00000604718 254 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.1-201ENST00000604752 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.2-201ENST00000604983 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.5-201ENST00000605253 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.4-201ENST00000605279 254 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.12-201ENST00000605291 253 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.8-201ENST00000605353 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.9-201ENST00000605428 253 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL670379.7-201ENST00000605823 252 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL354950.1-201ENST00000614150 568 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AC009233.1-201ENST00000616477 371 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AC092140.2-201ENST00000618027 521 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL445493.3-201ENST00000619568 477 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 AL353770.2-201ENST00000620024 78 ntBASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CDC42SE2Q9NRR3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 RNU6-661P-201ENST00000362409 107 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 SNORA22-201ENST00000383907 134 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 SNORA22C-201ENST00000384614 134 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 RNU2-43P-201ENST00000410306 190 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC009310.1-201ENST00000414414 451 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 Z82210.1-201ENST00000440037 231 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 CR769776.1-201ENST00000441254 787 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC092685.1-201ENST00000447960 1243 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 BX322784.1-201ENST00000455793 1077 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 RNU6-1256P-201ENST00000516539 103 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 RPL21P5-201ENST00000554662 472 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 MIR4295-201ENST00000585286 85 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC098826.3-201ENST00000603823 466 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC138473.1-201ENST00000605717 526 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 AC005539.1-201ENST00000443768 1479 ntBASIC0.73□□□□□ -2.29
CDC42SE2Q9NRR3 CBX3P1-201ENST00000325243 554 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 SNORA25.8-201ENST00000364831 128 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 RNU4-62P-201ENST00000410125 130 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 RNU7-95P-201ENST00000459222 64 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 RPL30P12-201ENST00000474666 353 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AC093767.1-201ENST00000504523 156 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 RPS3AP4-201ENST00000555161 764 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AL356432.3-201ENST00000568952 465 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 SNORD114-21-201ENST00000606412 72 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 AC103810.9-201ENST00000606688 112 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 MIR5739-201ENST00000619803 80 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 TEX21P-201ENST00000447107 1476 ntBASIC0.72□□□□□ -2.29
CDC42SE2Q9NRR3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AL359854.1-201ENST00000614203 1594 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 MFSD8-213ENST00000641134 1327 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RNA5SP213-201ENST00000391031 106 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 SNORA17.3-201ENST00000391159 129 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RNU1-78P-201ENST00000391248 165 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RPL37P10-201ENST00000412884 288 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AL160275.3-201ENST00000423876 471 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RPP40P1-201ENST00000426762 456 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RPS6P15-201ENST00000431996 751 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 RPL23AP16-201ENST00000441715 421 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 GDI2P2-201ENST00000445131 608 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 ARPC3P5-201ENST00000448802 534 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 CYP2C59P-201ENST00000457790 269 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 YWHAEP4-201ENST00000505390 198 ntBASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.71□□□□□ -2.3
CDC42SE2Q9NRR3 AC093677.1-201ENST00000514414 678 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms