Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RPS29P4-201ENST00000414733 161 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 SYF2P2-201ENST00000417620 583 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AL160275.3-201ENST00000423876 471 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC012498.1-201ENST00000424037 437 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC091286.1-201ENST00000431233 461 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 GPM6BP2-201ENST00000432046 144 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AL591704.1-201ENST00000432574 275 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 GPM6BP1-201ENST00000446387 144 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 CECR9-201ENST00000453421 199 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 RPL21P8-201ENST00000465083 535 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 RPL23AP67-201ENST00000465341 474 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC106707.2-201ENST00000484182 374 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 FAM92A1P2-202ENST00000504766 877 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 SUMO2P6-201ENST00000505273 288 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC109927.2-201ENST00000506416 303 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC006445.2-201ENST00000510061 472 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 RNU6-143P-201ENST00000516942 93 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 HIF1AP1-201ENST00000553642 175 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 MIR7851-201ENST00000610611 160 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC068831.7-201ENST00000616954 363 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 MIR6076-201ENST00000617521 113 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 MIR6075-201ENST00000620782 95 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AC010338.1-201ENST00000621823 717 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 AL512643.1-201ENST00000635735 524 ntBASIC3.09□□□□□ -1.91
HINT3Q9NQE9 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HINT3Q9NQE9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HINT3Q9NQE9 AL354685.2-201ENST00000448218 1447 ntBASIC3.09□□□□□ -1.92
HINT3Q9NQE9 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RPL7P26-201ENST00000333817 754 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RNA5SP295-201ENST00000362655 121 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RNU6-534P-201ENST00000364877 106 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 Y_RNA.295-201ENST00000364918 102 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 SNORA4.3-201ENST00000365564 137 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RNU6-140P-201ENST00000384566 108 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MIR218-2-201ENST00000385006 110 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AL354719.1-201ENST00000406535 843 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RNU4-46P-201ENST00000410818 138 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC126124.2-201ENST00000413542 321 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC007390.1-201ENST00000415722 356 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RPS15AP6-201ENST00000420703 385 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MRPS10P2-201ENST00000431226 381 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC008264.1-201ENST00000447612 367 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC104058.1-201ENST00000448028 297 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AL590664.1-201ENST00000448065 339 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MTCO3P38-201ENST00000468910 766 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 RPS15AP34-201ENST00000487776 387 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 SLC25A15P5-201ENST00000508033 253 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AL138889.2-201ENST00000603883 242 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AP000907.4-201ENST00000604143 237 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC104458.1-201ENST00000608243 463 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC024940.5-201ENST00000622889 474 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC091152.2-201ENST00000591628 2569 ntBASIC3.08□□□□□ -1.92
HINT3Q9NQE9 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HINT3Q9NQE9 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 FTLP6-201ENST00000355274 422 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 RNY3P3-201ENST00000363816 102 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 RNU6-217P-201ENST00000384164 104 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 EI24P2-201ENST00000397776 1076 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 RNU6-1068P-201ENST00000410958 103 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 ZNF863P-201ENST00000426746 417 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HINT3Q9NQE9 SNRPFP3-201ENST00000457792 225 ntBASIC3.07□□□□□ -1.92
HINT3Q9NQE9 U3.44-201ENST00000458938 192 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms