Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.52□□□□□ -1.85
NRIP3Q9NQ35 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 Y_RNA.5-201ENST00000362334 102 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 Y_RNA.187-201ENST00000363918 113 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 RNU6-882P-201ENST00000391025 103 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 RPL37P10-201ENST00000412884 288 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC074085.1-201ENST00000413598 418 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 FABP5P14-201ENST00000437273 393 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 RANP8-201ENST00000444720 713 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 NUTF2P3-201ENST00000448540 384 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 MTND1P17-201ENST00000448961 204 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC107399.1-201ENST00000451226 265 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 SCARNA18-201ENST00000459004 134 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 SNRPGP18-201ENST00000553000 214 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 MED28P6-201ENST00000558776 231 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 MIR4284-201ENST00000578924 81 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AC091167.4-201ENST00000605079 184 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 ATP1B3P1-201ENST00000605365 821 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 ARF4P1-201ENST00000605447 541 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 CUL1P1-201ENST00000509510 2425 ntBASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NRIP3Q9NQ35 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 Y_RNA.135-201ENST00000363439 95 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RNU6-463P-201ENST00000384340 107 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RNU6-310P-201ENST00000384655 107 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 MIR199A2-201ENST00000385289 110 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 SNORA16.2-201ENST00000390991 127 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AL138878.1-201ENST00000405131 347 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 Y_RNA.646-201ENST00000410980 101 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RNU6-516P-201ENST00000411381 104 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 UBE2FP1-201ENST00000416536 447 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 TBCAP1-201ENST00000436520 327 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RPL30P15-201ENST00000457129 321 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 DYNLL1P5-201ENST00000467158 270 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC087884.1-201ENST00000469738 328 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RPL7P42-201ENST00000481005 679 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 SMURF2P1-201ENST00000514992 481 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 RNA5SP179-201ENST00000517284 121 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 COX6CP5-201ENST00000527162 228 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 IMMP1LP2-201ENST00000552954 492 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC138761.3-201ENST00000579993 334 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC023043.2-201ENST00000589678 1026 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AL355365.1-201ENST00000616480 294 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC006111.3-201ENST00000622137 383 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 U6.114-201ENST00000636407 96 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 TPTE2P4-201ENST00000258589 1605 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 ZNF519P1-201ENST00000449011 1626 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 MTND5P19-201ENST00000424872 1794 ntBASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
NRIP3Q9NQ35 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 AC005183.1-201ENST00000603687 1979 ntBASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NRIP3Q9NQ35 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms