Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AL353193.1-201ENST00000421444 268 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 UBE2V1P8-201ENST00000437166 265 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 RPS12P2-201ENST00000439728 269 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 RBMX2P4-201ENST00000441256 376 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 MTND1P12-201ENST00000455231 147 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC109927.2-201ENST00000506416 303 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 RNU6-445P-201ENST00000516949 107 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AP001804.3-201ENST00000525146 880 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC136619.2-201ENST00000563361 631 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 MIR3682-201ENST00000581338 84 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 NRBF2P1-201ENST00000587407 859 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AP000860.1-201ENST00000605250 559 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC245517.5-201ENST00000611529 162 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC004696.1-201ENST00000614345 607 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AC068831.7-201ENST00000616954 363 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 AL359880.1-201ENST00000621879 266 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 SEPT14P19-203ENST00000633205 211 ntBASIC3.23□□□□□ -1.89
UPF2Q9HAU5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.23□□□□□ -1.89
UPF2Q9HAU5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 RNU5A-8P-201ENST00000364102 114 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 Y_RNA.372-201ENST00000365599 102 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL137014.1-201ENST00000420490 1226 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 EIF1P1-201ENST00000421436 341 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 UBE2V1P13-201ENST00000436983 439 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 USP9YP15-201ENST00000442391 422 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 BX510359.1-201ENST00000456973 237 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL121769.1-201ENST00000469473 401 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC135721.1-201ENST00000497954 479 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 HMGB1P29-201ENST00000505659 499 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC090572.1-201ENST00000519251 160 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 DEFB108A-201ENST00000530110 222 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC068790.3-201ENST00000602988 553 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AC121334.2-201ENST00000605387 271 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL158211.4-201ENST00000606988 584 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 MIR6863-201ENST00000636112 90 ntBASIC3.22□□□□□ -1.89
UPF2Q9HAU5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
UPF2Q9HAU5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RNA5SP374-201ENST00000362939 125 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RNU6-1078P-201ENST00000364522 103 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 Y_RNA.296-201ENST00000364930 108 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 Y_RNA.409-201ENST00000383990 98 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AL139095.1-201ENST00000404326 391 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RNU4-55P-201ENST00000410731 137 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC127391.1-201ENST00000411737 98 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC133104.1-201ENST00000429100 218 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 MTND3P21-201ENST00000433774 331 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC140076.1-201ENST00000449897 361 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 FGF7P6-202ENST00000451282 293 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RPL23AP41-201ENST00000484754 458 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RNU6-718P-201ENST00000516166 105 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 Vault.3-201ENST00000516676 95 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC022690.1-201ENST00000526681 550 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 MIR4801-201ENST00000582704 82 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 BDH2P1-201ENST00000602288 736 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC245014.2-201ENST00000603689 287 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC011451.2-201ENST00000604303 598 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC246785.4-201ENST00000605374 287 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC008962.1-201ENST00000605729 304 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AC007038.2-201ENST00000608095 740 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.21□□□□□ -1.9
UPF2Q9HAU5 AL133173.2-201ENST00000614270 90 ntBASIC3.21□□□□□ -1.9
UPF2Q9HAU5 U4.5-201ENST00000617137 123 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms