Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL512598.1-201ENST00000610158 273 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 AC025048.6-202ENST00000627667 438 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM4Q9C037 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM4Q9C037 ZNF849P-201ENST00000594711 1566 ntBASIC1.72□□□□□ -2.13
TRIM4Q9C037 RNU4-51P-201ENST00000364206 140 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 SNORD65C-201ENST00000390962 71 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AL356131.1-201ENST00000405826 414 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 RAC1P8-201ENST00000427086 527 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 MICF-203ENST00000432679 129 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC002542.1-201ENST00000440683 193 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 MTND5P8-201ENST00000449817 1083 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 snoU109.1-201ENST00000459339 135 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 CYCSP2-201ENST00000558168 301 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC104229.1-201ENST00000561364 255 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AP000403.1-201ENST00000603349 851 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AC004067.1-201ENST00000608733 700 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AL589743.7-201ENST00000612637 233 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 AL512506.2-201ENST00000624472 458 ntBASIC1.71□□□□□ -2.14
TRIM4Q9C037 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TRIM4Q9C037 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM4Q9C037 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TRIM4Q9C037 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 MTCO2P31-201ENST00000402702 684 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AP000275.1-201ENST00000411943 390 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC005297.2-201ENST00000450430 606 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 RPL23AP3-201ENST00000453844 468 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC112518.2-201ENST00000508565 425 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC107393.1-201ENST00000512403 346 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 SCARNA3-201ENST00000517097 143 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 CBX3P7-201ENST00000532876 502 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AL132857.1-201ENST00000555180 708 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM4Q9C037 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 AC080188.3-201ENST00000624842 748 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 MIR7157-201ENST00000635801 60 ntBASIC1.7□□□□□ -2.14
TRIM4Q9C037 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM4Q9C037 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM4Q9C037 RNU6-741P-201ENST00000383889 107 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TRIM4Q9C037 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TRIM4Q9C037 TMSB4XP8-201ENST00000402089 135 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 MIR1294-201ENST00000408503 142 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 TMSB4XP6-201ENST00000415187 135 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AL357078.2-201ENST00000416486 427 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC092634.6-201ENST00000418558 192 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.69□□□□□ -2.14
TRIM4Q9C037 TMSB4XP1-201ENST00000424567 135 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 VN1R42P-201ENST00000424651 344 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 ZNF863P-201ENST00000426746 417 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC114878.1-201ENST00000441166 358 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 RPL21P134-201ENST00000453468 483 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 RPL26P9-201ENST00000457466 433 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC118282.2-201ENST00000508739 374 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 RNU6-970P-201ENST00000516312 107 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 MIR892C-201ENST00000516410 77 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AP005639.2-201ENST00000527592 928 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.69□□□□□ -2.14
TRIM4Q9C037 uc_338.5-201ENST00000611839 155 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC012150.2-201ENST00000621300 544 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 AC109454.4-201ENST00000623411 649 ntBASIC1.69□□□□□ -2.14
TRIM4Q9C037 SNORD114-26-201ENST00000363543 72 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 RNU6-884P-201ENST00000363889 107 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 RNU2-28P-201ENST00000410457 189 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 CCDC58P2-201ENST00000417131 366 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC019178.2-201ENST00000423595 505 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 Z73417.1-201ENST00000447373 778 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC108729.2-201ENST00000476543 840 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC007375.1-201ENST00000554513 578 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AL133241.1-201ENST00000556832 487 ntBASIC1.68□□□□□ -2.14
TRIM4Q9C037 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms