Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-18P-201ENST00000384527 107 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 BTF3L4P2-201ENST00000392798 346 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 FCF1P2-201ENST00000415284 583 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC098614.2-201ENST00000426040 255 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AL353718.1-201ENST00000451028 517 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 RNU2-19P-201ENST00000517288 84 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 FAM60BP-201ENST00000578364 658 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC105245.1-201ENST00000581934 244 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC040174.2-201ENST00000602701 465 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC135507.1-201ENST00000607214 561 ntBASIC1.32□□□□□ -2.2
SCAPERQ9BY12 AC009541.1-201ENST00000438279 2662 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC004383.1-201ENST00000438135 289 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 MTCYBP3-201ENST00000445588 1137 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 SUMO2P2-201ENST00000456482 255 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC023141.11-201ENST00000508864 202 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.31□□□□□ -2.2
SCAPERQ9BY12 MED28P6-201ENST00000558776 231 ntBASIC1.31□□□□□ -2.2
SCAPERQ9BY12 ICE2P2-201ENST00000483823 2787 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 RNU4-31P-201ENST00000384211 141 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 TATDN1P1-201ENST00000414123 891 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 EIF4EP4-201ENST00000424916 578 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AL714022.1-201ENST00000439897 151 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC107626.1-201ENST00000471084 183 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC116337.2-201ENST00000477662 156 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 SNORA31.25-201ENST00000517242 134 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 HMGB1P14-201ENST00000557424 591 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 MIR1273G-201ENST00000577677 100 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AC007742.2-201ENST00000618226 398 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 AP006248.3-201ENST00000623580 594 ntBASIC1.3□□□□□ -2.2
SCAPERQ9BY12 RNA5SP457-201ENST00000363657 124 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 MIR147B-201ENST00000390185 80 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AC099677.1-201ENST00000420575 175 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AC234064.1-201ENST00000436312 247 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AC104629.2-201ENST00000468627 598 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 OR52A4P-202ENST00000481634 799 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AL590095.2-201ENST00000604136 117 ntBASIC1.29□□□□□ -2.2
SCAPERQ9BY12 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 RNU6-339P-201ENST00000384310 107 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 MIR936-201ENST00000401264 98 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 UBE2FP1-201ENST00000416536 447 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 KLF3P2-201ENST00000465138 268 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AC027575.1-201ENST00000481064 460 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 RPS27AP10-201ENST00000496103 208 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AC021749.1-201ENST00000604322 607 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 AP003476.1-201ENST00000623984 516 ntBASIC1.28□□□□□ -2.2
SCAPERQ9BY12 TPTE2P4-201ENST00000258589 1605 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.27□□□□□ -2.21
SCAPERQ9BY12 RPL23AP6-201ENST00000446637 472 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 SNORA70.16-201ENST00000516390 95 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AP005639.2-201ENST00000527592 928 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AC092470.1-201ENST00000546187 132 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AC008127.2-201ENST00000549925 1075 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AL049870.4-201ENST00000555741 486 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 CYCSP2-201ENST00000558168 301 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SCAPERQ9BY12 MIR5571-201ENST00000577998 113 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 AC011260.1-201ENST00000578420 472 ntBASIC1.27□□□□□ -2.21
SCAPERQ9BY12 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 RNU6-989P-201ENST00000362756 107 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 FGF7P5-201ENST00000441829 291 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AL022238.1-201ENST00000442557 355 ntBASIC1.26□□□□□ -2.21
SCAPERQ9BY12 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.26□□□□□ -2.21
SCAPERQ9BY12 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms