Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RPL37P6-201ENST00000460682 294 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL049874.1-201ENST00000489560 388 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC104136.1-201ENST00000512969 394 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-976P-201ENST00000516086 111 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-927P-201ENST00000516199 100 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-1016P-201ENST00000516689 94 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU7-143P-201ENST00000516781 65 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 Y_RNA.720-201ENST00000517166 92 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RANP9-201ENST00000519957 271 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 RNU6-323P-201ENST00000521915 107 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC022968.1-201ENST00000567372 442 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC005255.1-201ENST00000593748 216 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC012603.1-201ENST00000606424 528 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 MIR6868-201ENST00000611215 58 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC034102.8-201ENST00000615146 484 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 ATP5A1P2-202ENST00000616464 443 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC022418.1-201ENST00000624118 445 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AL049641.1-201ENST00000441055 1948 ntBASIC3.85□□□□□ -1.79
NDC1Q9BTX1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NDC1Q9BTX1 AC068254.2-201ENST00000623938 3577 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 Y_RNA.5-201ENST00000362334 102 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 Y_RNA.148-201ENST00000363557 117 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RNU6-1040P-201ENST00000383974 107 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RNU6-463P-201ENST00000384340 107 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AL590704.1-201ENST00000402856 794 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RNA5SP39-201ENST00000411245 120 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 BX842559.1-201ENST00000419615 532 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RPL7P37-201ENST00000425095 738 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AL035666.1-201ENST00000446195 348 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC008264.1-201ENST00000447612 367 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 HMGN2P21-201ENST00000447764 270 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RPL23AP31-201ENST00000456160 467 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 HMGB3P30-201ENST00000457863 606 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 RN7SL542P-201ENST00000467147 294 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC097473.1-201ENST00000508142 408 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC116337.1-201ENST00000509680 687 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC091516.1-201ENST00000549191 703 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 MIR15A-201ENST00000607334 83 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC010205.1-201ENST00000616668 449 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC006133.1-201ENST00000617106 264 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 LINC00901.1-201ENST00000617252 152 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 7SK.10-201ENST00000621414 298 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC067931.1-201ENST00000624190 671 ntBASIC3.84□□□□□ -1.79
NDC1Q9BTX1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
NDC1Q9BTX1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 ZNF962P-201ENST00000443465 3140 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RNU6-1115P-201ENST00000362490 106 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RNU6-1309P-201ENST00000363305 108 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 SNORA75B-201ENST00000384053 137 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RNU6-890P-201ENST00000384121 107 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 Y_RNA.473-201ENST00000384333 102 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 MIR514A1-201ENST00000385133 98 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RNU6-1106P-201ENST00000390845 107 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RPS29P7-201ENST00000439662 171 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 IPO7P1-201ENST00000442031 636 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 snoU13.4-201ENST00000458916 104 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RN7SL271P-201ENST00000487601 295 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC146944.2-203ENST00000502493 354 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC025554.1-201ENST00000505641 188 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC009901.1-201ENST00000506703 541 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC139495.1-202ENST00000513164 354 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 CYCSP27-201ENST00000527643 293 ntBASIC3.83□□□□□ -1.8
NDC1Q9BTX1 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.83□□□□□ -1.8
NDC1Q9BTX1 MIR3921-201ENST00000577308 85 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms