Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL031183.1-201ENST00000457667 207 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 RPS20P20-201ENST00000460498 340 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AP000873.5-201ENST00000533906 236 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 MIR3913-1-201ENST00000577744 102 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 MIR4528-201ENST00000577763 90 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 MIR5194-201ENST00000582634 120 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC073648.5-201ENST00000603502 305 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC012360.2-201ENST00000609349 391 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC104073.3-201ENST00000610942 955 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC245517.5-201ENST00000611529 162 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC084757.4-201ENST00000616350 526 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 AC093591.3-201ENST00000634516 308 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 MIR4275-201ENST00000636486 87 ntBASIC2.39□□□□□ -2.03
EBF4Q9BQW3 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
EBF4Q9BQW3 Y_RNA.3-201ENST00000362331 103 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RNU5A-8P-201ENST00000364102 114 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 Y_RNA.505-201ENST00000384489 102 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 Y_RNA.517-201ENST00000384551 106 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL360182.1-201ENST00000397433 468 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RNU2-66P-201ENST00000410650 161 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 HMGN2P30-201ENST00000423237 256 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL356867.1-201ENST00000429623 299 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL512844.2-201ENST00000433990 593 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 USP9YP28-201ENST00000435142 589 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 TIMM9P1-201ENST00000436122 256 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RPS24P13-201ENST00000442520 397 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RNU7-59P-201ENST00000459101 61 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 RPL37P25-201ENST00000507308 276 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 HMGN1P28-201ENST00000521340 364 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AP003122.4-201ENST00000530980 758 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AMZ2P1-203ENST00000565833 850 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 MIR4446-201ENST00000578505 67 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 MIR4444-1-201ENST00000581696 74 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 MIR3609-201ENST00000582661 80 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 MIR4444-2-201ENST00000584390 74 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC087683.1-201ENST00000591187 441 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC020895.1-201ENST00000595362 272 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC010620.2-201ENST00000600135 313 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 DEFB131E-202ENST00000602581 683 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC068790.2-201ENST00000602601 557 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 DPPA3P3-201ENST00000603842 430 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC006566.1-201ENST00000608943 513 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC122108.2-201ENST00000611946 526 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC009159.1-201ENST00000618386 642 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC244100.1-202ENST00000621554 382 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 AC007785.2-201ENST00000598627 1916 ntBASIC2.38□□□□□ -2.03
EBF4Q9BQW3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.38□□□□□ -2.03
EBF4Q9BQW3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 MTND5P1-201ENST00000445440 1375 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 FGF7P2-201ENST00000332473 296 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 RNU6-223P-201ENST00000362830 107 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 RNU6-533P-201ENST00000384144 107 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AL139397.2-201ENST00000404529 772 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AL359634.1-202ENST00000404721 284 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 RNU6-248P-201ENST00000410720 107 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 Y_RNA.619-201ENST00000410951 90 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 RNU6-195P-201ENST00000411352 109 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 SPA17P1-201ENST00000416656 452 ntBASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.37□□□□□ -2.03
EBF4Q9BQW3 AC007919.1-201ENST00000429380 217 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms