Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNA5SP220-201ENST00000516298 104 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 SCARNA1-201ENST00000517138 166 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.13□□□□□ -2.07
CDX2Q99626 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC090616.3-201ENST00000582184 217 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 MIR4452-201ENST00000583004 71 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC011451.2-201ENST00000604303 598 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC131235.4-201ENST00000609288 620 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 MIR6734-201ENST00000621166 68 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AL359740.1-201ENST00000624340 592 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.13□□□□□ -2.07
CDX2Q99626 AC099654.9-201ENST00000637055 678 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 AC006927.4-201ENST00000639187 543 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.13□□□□□ -2.07
CDX2Q99626 TPTE2P4-201ENST00000258589 1605 ntBASIC2.13□□□□□ -2.07
CDX2Q99626 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.13□□□□□ -2.07
CDX2Q99626 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CDX2Q99626 AC106754.1-201ENST00000562632 1513 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 MTND4P35-201ENST00000604257 1375 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
CDX2Q99626 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CDX2Q99626 RNU4-92P-201ENST00000363783 136 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 Y_RNA.327-201ENST00000365201 102 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 DEFA7P-201ENST00000382676 285 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 Z85995.1-201ENST00000415547 335 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC018630.2-202ENST00000422992 927 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 COX7BP2-201ENST00000437976 242 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 BNIP3P2-201ENST00000441221 577 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 EEF1E1P1-201ENST00000446998 430 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX2Q99626 EXOSC3P1-201ENST00000448649 500 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AL137159.1-201ENST00000452808 512 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 RNU6-420P-201ENST00000458780 107 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 snoU13.8-201ENST00000458890 104 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
CDX2Q99626 AC021382.1-201ENST00000483523 359 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.12□□□□□ -2.07
CDX2Q99626 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 MTCYBP35-201ENST00000503630 1137 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 OR5BM1P-201ENST00000512021 366 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 MTND2P32-201ENST00000521584 1038 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 AC087441.2-201ENST00000529141 262 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.12□□□□□ -2.07
CDX2Q99626 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.12□□□□□ -2.07
CDX2Q99626 MTND1P24-201ENST00000552175 861 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 MTND1P8-201ENST00000571424 950 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC005951.2-201ENST00000576282 495 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 UBE2L4-201ENST00000587688 464 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 WISP1-OT1-201ENST00000602893 642 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX2Q99626 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX2Q99626 AC245297.2-201ENST00000610119 565 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AL158801.5-201ENST00000623123 465 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AC231657.1-201ENST00000624313 397 ntBASIC2.12□□□□□ -2.07
CDX2Q99626 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.12□□□□□ -2.07
CDX2Q99626 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
CDX2Q99626 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDX2Q99626 AC099786.3-201ENST00000565735 1410 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 PABPC1P9-201ENST00000426076 1612 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC233981.2-201ENST00000611524 1614 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC008669.1-201ENST00000565823 2178 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CDX2Q99626 RNU5A-1-201ENST00000362698 116 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU6-777P-201ENST00000364265 104 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU1-51P-201ENST00000365345 176 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDX2Q99626 SNORA67.5-201ENST00000391036 107 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU6-1242P-201ENST00000391052 103 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 ELOCP9-201ENST00000418624 239 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC092047.1-201ENST00000424997 240 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL358075.3-201ENST00000426289 226 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC129850.1-201ENST00000436203 508 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 BMI1P1-201ENST00000445879 941 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 MTND1P9-201ENST00000453775 944 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL109741.2-201ENST00000455561 343 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 SNRPFP4-201ENST00000456366 242 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX2Q99626 PPP1R2P5-201ENST00000457256 603 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 RNU7-95P-201ENST00000459222 64 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.11□□□□□ -2.07
CDX2Q99626 LARP1BP2-201ENST00000486594 519 ntBASIC2.11□□□□□ -2.07
CDX2Q99626 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.11□□□□□ -2.07
CDX2Q99626 AC109445.1-201ENST00000512356 383 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms