Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 MTCYBP23-201ENST00000558717 1102 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
CFAP54Q96N23 AL161449.1-201ENST00000414531 1199 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC098862.1-201ENST00000504991 413 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 SNORA16B-201ENST00000364674 135 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 SNORA22-201ENST00000383907 134 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 SNORA22C-201ENST00000384614 134 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 SNORA8.3-201ENST00000384679 139 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 TOMM22P2-201ENST00000430735 237 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 RPS24P6-201ENST00000452670 400 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 RPL21P104-201ENST00000464143 478 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 RPL39P28-201ENST00000465655 155 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AL135752.1-201ENST00000479477 471 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.49□□□□□ -2.33
CFAP54Q96N23 AC108676.2-201ENST00000605225 163 ntBASIC0.49□□□□□ -2.33
CFAP54Q96N23 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC087359.1-201ENST00000508335 1740 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.48□□□□□ -2.33
CFAP54Q96N23 AL031183.1-201ENST00000457667 207 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC097493.1-201ENST00000463958 372 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.48□□□□□ -2.33
CFAP54Q96N23 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC123786.2-201ENST00000603459 275 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC003001.2-201ENST00000616294 831 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AL589935.2-201ENST00000616471 1231 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.48□□□□□ -2.33
CFAP54Q96N23 AL356473.1-201ENST00000406203 1408 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 Y_RNA.35-201ENST00000362601 101 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 SFR1P2-201ENST00000421841 730 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 RPS25P9-201ENST00000435591 252 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 RPL31P60-201ENST00000478450 367 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.48□□□□□ -2.33
CFAP54Q96N23 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.48□□□□□ -2.33
CFAP54Q96N23 MIR4493-201ENST00000584016 73 ntBASIC0.48□□□□□ -2.33
CFAP54Q96N23 MIR515-2-201ENST00000384883 83 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 MIR515-1-201ENST00000384884 83 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 MIR627-201ENST00000384979 97 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-1320P-201ENST00000390838 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-1269P-201ENST00000391139 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-599P-201ENST00000459383 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-1193P-201ENST00000459461 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 AC073569.3-201ENST00000619055 682 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-368P-201ENST00000620928 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 RNU6-538P-201ENST00000622329 107 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 ZNF33CP-201ENST00000432492 2030 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 CD24P4-201ENST00000382840 243 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 OSTCP8-201ENST00000445117 448 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 OR6C72P-201ENST00000451403 892 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 TPT1P8-201ENST00000510120 555 ntBASIC0.47□□□□□ -2.33
CFAP54Q96N23 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.47□□□□□ -2.33
CFAP54Q96N23 Y_RNA.552-201ENST00000384665 112 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 RSL24D1P8-201ENST00000434442 492 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.46□□□□□ -2.34
CFAP54Q96N23 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.46□□□□□ -2.34
CFAP54Q96N23 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 MIR101-1-201ENST00000362265 75 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 RNU4-73P-201ENST00000363164 141 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 MRPL35P1-201ENST00000404272 572 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 Z80107.1-201ENST00000436830 412 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC008083.4-201ENST00000615076 444 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.46□□□□□ -2.34
CFAP54Q96N23 RNU6-19P-201ENST00000384718 107 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.46□□□□□ -2.34
CFAP54Q96N23 UBE2FP1-201ENST00000416536 447 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 MRPL35P3-201ENST00000421557 364 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 AC027575.1-201ENST00000481064 460 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 SNORA62.5-201ENST00000516634 120 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 RNA5SP108-201ENST00000605921 117 ntBASIC0.46□□□□□ -2.34
CFAP54Q96N23 RNA5SP450-201ENST00000411206 102 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AC098583.1-201ENST00000480875 255 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CFAP54Q96N23 OR5AL2P-201ENST00000532185 920 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 MIR5190-201ENST00000581537 80 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 AC239798.3-201ENST00000454459 408 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 SNORA3.4-201ENST00000515969 96 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms