Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC027176.1-201ENST00000560204 514 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC009712.1-201ENST00000564938 316 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 MIR3198-2-201ENST00000577868 80 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC009831.4-201ENST00000620744 325 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC019226.1-201ENST00000625666 515 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AL137790.1-201ENST00000634283 177 ntBASIC2.35□□□□□ -2.03
PKNOX2Q96KN3 AC099786.3-201ENST00000565735 1410 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 RNU6-289P-201ENST00000364093 107 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 RNU1-39P-201ENST00000383897 165 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 RNU6-997P-201ENST00000384725 107 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 MIR122-201ENST00000385044 85 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AL590084.2-201ENST00000401481 382 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 USP9YP33-201ENST00000412220 421 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 RPS25P9-201ENST00000435591 252 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 USP9YP35-201ENST00000435696 412 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 EEF1E1P1-201ENST00000446998 430 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 CYP2C59P-201ENST00000457790 269 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC005410.1-202ENST00000460347 485 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC116353.3-201ENST00000511215 249 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 RNU6-970P-201ENST00000516312 107 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 HMGN1P28-201ENST00000521340 364 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC023813.2-201ENST00000564321 469 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AC092608.2-201ENST00000624427 218 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 AL359854.1-201ENST00000614203 1594 ntBASIC2.34□□□□□ -2.03
PKNOX2Q96KN3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 RNU6-884P-201ENST00000363889 107 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 XGY1-201ENST00000381172 446 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 SNORA8-201ENST00000384574 139 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MIR34A-201ENST00000385130 110 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 RNU2-33P-201ENST00000410344 192 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC006946.1-201ENST00000429106 328 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 FABP5P14-201ENST00000437273 393 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MTND6P13-201ENST00000443510 523 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AL031313.1-201ENST00000448435 256 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC117503.1-201ENST00000472241 394 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 RPS20P22-201ENST00000473700 357 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC108729.1-201ENST00000487812 947 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 GNAI2P1-201ENST00000541815 315 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC074050.1-201ENST00000563247 211 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 BNIP3P25-201ENST00000596023 559 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AL139344.1-201ENST00000605228 195 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 AC006386.1-201ENST00000619436 415 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MTND1P37-201ENST00000636562 264 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MTND4P9-201ENST00000507819 1346 ntBASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
PKNOX2Q96KN3 U3.13-201ENST00000364804 214 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 USP9YP13-201ENST00000417797 480 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 EXOSC3P1-201ENST00000448649 500 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 FCF1P6-201ENST00000456841 595 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 BZW1P2-201ENST00000473537 826 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 TRBV1-201ENST00000476502 284 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AC011825.1-201ENST00000484967 388 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 SNORA44.1-201ENST00000517031 108 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AC007938.3-201ENST00000604965 623 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 TUG1_2.1-201ENST00000614234 87 ntBASIC2.32□□□□□ -2.04
PKNOX2Q96KN3 AC010133.1-201ENST00000615809 842 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms