Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 TPTE2P4-201ENST00000258589 1605 ntBASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP3Q96JB5 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC103710.2-202ENST00000641454 2853 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC118273.1-201ENST00000525324 3006 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC008568.2-201ENST00000623862 2313 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 UBE2L2-201ENST00000254302 429 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 Y_RNA.86-201ENST00000363020 111 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 MIR134-201ENST00000385258 73 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 RNU4-46P-201ENST00000410818 138 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 HSPD1P21-201ENST00000436541 245 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AL357552.1-201ENST00000445254 415 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 MTND3P16-201ENST00000452205 344 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 RPL37P6-201ENST00000460682 294 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC087588.1-201ENST00000462203 316 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 SNORA20.3-201ENST00000516880 132 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC026333.2-201ENST00000542164 106 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 BNIP3P10-201ENST00000605360 577 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC006504.8-201ENST00000621046 635 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC022149.2-201ENST00000621061 203 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AC039056.2-201ENST00000622261 511 ntBASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CDK5RAP3Q96JB5 AL161912.2-201ENST00000565707 3007 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 RNU5E-4P-201ENST00000364931 120 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 RNU4-66P-201ENST00000365199 138 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 RPS4XP3-201ENST00000398541 413 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 BX842559.1-201ENST00000419615 532 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AL590383.1-201ENST00000428602 75 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC007919.1-201ENST00000429380 217 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC073063.1-201ENST00000434352 607 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 NDUFB4P6-201ENST00000436819 366 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AL121601.2-201ENST00000438019 707 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 HIGD1AP11-201ENST00000438361 280 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 CBWD4P-201ENST00000445695 655 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 RNU7-180P-201ENST00000459240 63 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 HMGN2P13-201ENST00000476476 274 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC106707.2-201ENST00000484182 374 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 TTC39CP1-201ENST00000512513 755 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 SNORA70.19-201ENST00000516717 90 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AP006245.1-201ENST00000522549 120 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 CENPUP1-201ENST00000526649 1202 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC005730.3-201ENST00000583067 366 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AL138889.2-201ENST00000603883 242 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC013553.2-201ENST00000604244 589 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC006111.3-201ENST00000622137 383 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC034229.5-201ENST00000624258 185 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 AC100810.6-201ENST00000638068 285 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
CDK5RAP3Q96JB5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-512P-201ENST00000364438 103 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RNU4-20P-201ENST00000365601 151 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RNU6-332P-201ENST00000391193 108 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AL078595.1-201ENST00000404458 226 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 Z85995.1-201ENST00000415547 335 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AL451062.2-201ENST00000427515 271 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 CYCSP4-201ENST00000429682 331 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RPL23AP67-201ENST00000465341 474 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RPL23AP14-201ENST00000468281 468 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RPL7P5-201ENST00000471472 736 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RPL21P99-201ENST00000480369 423 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RPL39P36-201ENST00000490784 156 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 MTND4LP22-201ENST00000508209 276 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 RNA5SP471-201ENST00000516971 106 ntBASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.91□□□□□ -1.78
CDK5RAP3Q96JB5 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms