Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SNRNP40Q96DI7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC062016.1-201ENST00000355719 319 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 RNU4-82P-201ENST00000362443 140 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 RNU6-778P-201ENST00000363269 103 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 RNU6-960P-201ENST00000364056 120 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 RNU6-188P-201ENST00000364207 107 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC096649.2-201ENST00000416186 393 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 NUP35P1-201ENST00000422734 947 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC007283.2-201ENST00000424739 197 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 SKA2P1-201ENST00000425592 390 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 HMGB3P12-201ENST00000438745 556 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AL513043.1-201ENST00000439124 535 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC098831.1-201ENST00000440661 216 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC125238.1-201ENST00000448842 249 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 snoU109.1-201ENST00000459339 135 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 RPS27P29-201ENST00000463110 252 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC139453.3-201ENST00000493276 369 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC010486.3-201ENST00000511602 785 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC174048.1-201ENST00000603389 144 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC019159.1-201ENST00000605094 187 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC068276.1-201ENST00000605793 379 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 AC130324.3-201ENST00000614165 542 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 MIR6715A-201ENST00000615929 79 ntBASIC2.72□□□□□ -1.97
SNRNP40Q96DI7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 NACAP2-201ENST00000318548 624 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNU5E-1-201ENST00000362477 120 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNU4-21P-201ENST00000362802 126 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNY4P34-201ENST00000364779 95 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNY3P10-201ENST00000384764 102 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNU6-750P-201ENST00000390946 107 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 SNORA26.8-201ENST00000391306 124 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 FO393413.1-201ENST00000402892 195 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNA5SP293-201ENST00000410527 113 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC127391.1-201ENST00000411737 98 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 TAF9P1-201ENST00000445421 515 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 MTATP6P7-201ENST00000453315 681 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 TAF9P2-201ENST00000454958 515 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 SNRPGP9-201ENST00000456025 225 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 HMGN1P18-201ENST00000457642 277 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC021205.2-201ENST00000480069 347 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RPL23AP70-201ENST00000483361 460 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 GLYCAM1-201ENST00000546596 285 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AP002360.4-201ENST00000606980 481 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AC022893.3-201ENST00000607665 437 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 AL133173.2-201ENST00000614270 90 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 MIR3974-201ENST00000637126 96 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 U2.21-201ENST00000637295 81 ntBASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SNRNP40Q96DI7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC010889.1-201ENST00000566193 2666 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 SNORA18.3-201ENST00000384122 132 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RNU6-851P-201ENST00000384565 107 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 MIR627-201ENST00000384979 97 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RPL23AP32-201ENST00000395315 459 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RPS4XP8-201ENST00000402039 771 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AC009518.2-201ENST00000418056 731 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 CYCSP46-201ENST00000423569 204 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 OR2AS1P-201ENST00000427827 319 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RPL23AP30-201ENST00000432419 501 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RPS24P1-201ENST00000438550 371 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 DPPA3P1-201ENST00000448050 469 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 AL109933.2-201ENST00000452651 260 ntBASIC2.7□□□□□ -1.98
SNRNP40Q96DI7 RPS27AP8-201ENST00000452665 445 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms