Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.98□□□□□ -2.09
CPNE4Q96A23 PCMTD1P7-201ENST00000634506 357 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC099063.3-201ENST00000642066 185 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CPNE4Q96A23 AC004520.1-201ENST00000608362 1413 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CPNE4Q96A23 MTND5P6-201ENST00000422338 1798 ntBASIC1.98□□□□□ -2.09
CPNE4Q96A23 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPNE4Q96A23 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 OR56A5-201ENST00000340110 738 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPNE4Q96A23 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPNE4Q96A23 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CPNE4Q96A23 RNU6-432P-201ENST00000384196 109 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 RNU6-906P-201ENST00000384700 70 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 CIR1P3-201ENST00000405137 479 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC106883.1-201ENST00000418805 562 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 DPH3P2-201ENST00000422618 250 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 ZNF863P-201ENST00000426746 417 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AL139415.2-201ENST00000431968 163 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC004854.1-201ENST00000440356 349 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 MTCO3P45-201ENST00000443036 613 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 TPT1P14-201ENST00000448018 505 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 ANXA2P1-201ENST00000505539 926 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPNE4Q96A23 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC136601.2-201ENST00000604356 474 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC097478.2-201ENST00000610572 514 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 SDR42E1P2-201ENST00000614861 481 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.97□□□□□ -2.09
CPNE4Q96A23 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CPNE4Q96A23 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 HSPE1P11-201ENST00000339579 310 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 RNU6-853P-201ENST00000364306 107 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 OR5H15-201ENST00000383696 930 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 SNORA70B-201ENST00000384210 135 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 TXNP7-201ENST00000406296 293 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 CCNG1P1-201ENST00000406783 885 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 RN7SKP223-201ENST00000410582 62 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 MTCO1P17-201ENST00000411522 491 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 MTCO2P8-201ENST00000412213 658 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CPNE4Q96A23 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 PTENP1-201ENST00000447117 1215 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 RPL26P9-201ENST00000457466 433 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 AC004263.1-201ENST00000479327 332 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 TRBV12-1-201ENST00000479785 344 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 SCARNA16.3-201ENST00000516595 184 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CPNE4Q96A23 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.96□□□□□ -2.1
CPNE4Q96A23 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 AL391001.1-201ENST00000602747 715 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 AC013412.1-201ENST00000610687 192 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
CPNE4Q96A23 MTND5P33-201ENST00000571250 1450 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 ZNF29P-201ENST00000225587 168 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CPNE4Q96A23 U8.2-201ENST00000363156 134 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 SNORA4.1-201ENST00000364263 144 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
CPNE4Q96A23 RNU6-925P-201ENST00000384629 104 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 MIR218-1-201ENST00000384999 110 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 RNU6-750P-201ENST00000390946 107 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CPNE4Q96A23 SNORA11.4-201ENST00000408823 129 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 AL109913.1-201ENST00000421173 514 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 MTCO2P23-201ENST00000425216 680 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 MTND3P1-201ENST00000441336 220 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 AC096638.1-201ENST00000444678 216 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.95□□□□□ -2.1
CPNE4Q96A23 AL121769.1-201ENST00000469473 401 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 AC110760.3-202ENST00000515177 371 ntBASIC1.95□□□□□ -2.1
CPNE4Q96A23 AC105185.1-201ENST00000518705 535 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms