Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC4Q92889 AF127577.6-201ENST00000623352 2191 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 MIR372-201ENST00000362225 67 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 Y_RNA.162-201ENST00000363683 102 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 SNORA7.2-201ENST00000364446 145 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 RNU6-1297P-201ENST00000384415 104 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 MIR199A2-201ENST00000385289 110 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.26□□□□□ -1.73
ERCC4Q92889 AL591704.1-201ENST00000432574 275 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.26□□□□□ -1.73
ERCC4Q92889 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 Y_RNA.635-201ENST00000459041 101 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 FTH1P2-201ENST00000466086 412 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 UBE2CP3-201ENST00000502715 450 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 HIGD1AP13-201ENST00000509878 289 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AC005921.1-201ENST00000510589 286 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 RNU6-559P-201ENST00000516151 98 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 Y_RNA.689-201ENST00000516589 107 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 TRMT10BP1-201ENST00000519377 943 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC4Q92889 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.26□□□□□ -1.73
ERCC4Q92889 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.26□□□□□ -1.73
ERCC4Q92889 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 DUSP12P1-201ENST00000612874 516 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.26□□□□□ -1.73
ERCC4Q92889 AL359547.2-201ENST00000615810 418 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AL359757.2-201ENST00000624309 274 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 RNA5SP196-201ENST00000625967 102 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 AC134503.1-201ENST00000633048 54 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 HSPA8P4-201ENST00000511877 1920 ntBASIC4.26□□□□□ -1.73
ERCC4Q92889 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ERCC4Q92889 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ERCC4Q92889 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.25□□□□□ -1.73
ERCC4Q92889 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 RNA5SP479-201ENST00000364858 117 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 RNA5SP189-201ENST00000364920 115 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 RNU6-629P-201ENST00000384061 103 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 SNORD70.1-201ENST00000391007 85 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 MIR1193-201ENST00000408109 78 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 MIR548F5-201ENST00000408421 86 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AC092809.3-201ENST00000415453 231 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 MTCO1P39-201ENST00000426148 480 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 OR4C10P-201ENST00000434991 931 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.25□□□□□ -1.73
ERCC4Q92889 MTND1P17-201ENST00000448961 204 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.25□□□□□ -1.73
ERCC4Q92889 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.25□□□□□ -1.73
ERCC4Q92889 MTND5P5-201ENST00000503764 376 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 SCARNA14-201ENST00000516903 136 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 RNA5SP454-201ENST00000517231 127 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 ERHP1-201ENST00000523006 310 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.25□□□□□ -1.73
ERCC4Q92889 AP000763.2-201ENST00000540641 163 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AC008011.1-201ENST00000545989 227 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.25□□□□□ -1.73
ERCC4Q92889 AL163153.1-201ENST00000554223 283 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 AC005951.2-201ENST00000576282 495 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 FAM157A-202ENST00000615155 405 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 MIR8058-201ENST00000615737 89 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 MIR6500-201ENST00000622700 86 ntBASIC4.25□□□□□ -1.73
ERCC4Q92889 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.25□□□□□ -1.73
ERCC4Q92889 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
ERCC4Q92889 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
ERCC4Q92889 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.25□□□□□ -1.73
ERCC4Q92889 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC4Q92889 SPRR2C-201ENST00000290702 219 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNA5SP515-201ENST00000364570 118 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNU6-190P-201ENST00000384154 102 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 Y_RNA.579-201ENST00000390939 94 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL360182.1-201ENST00000397433 468 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 EI24P2-201ENST00000397776 1076 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL391417.1-201ENST00000404100 426 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AC074085.1-201ENST00000413598 418 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 MTCO2P27-201ENST00000420740 428 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.24□□□□□ -1.73
ERCC4Q92889 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.24□□□□□ -1.73
ERCC4Q92889 FABP5P13-201ENST00000452144 328 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNU7-167P-201ENST00000459160 62 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.24□□□□□ -1.73
ERCC4Q92889 TRBV1-201ENST00000476502 284 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 HMGB3P15-201ENST00000507326 574 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AC005741.1-201ENST00000511094 432 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNU2-69P-201ENST00000516061 100 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNU6-1069P-201ENST00000516612 133 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RNU6-677P-201ENST00000516914 101 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 RANP9-201ENST00000519957 271 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AP004242.1-201ENST00000533701 349 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
ERCC4Q92889 IMMP1LP2-201ENST00000552954 492 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.24□□□□□ -1.73
ERCC4Q92889 AL121821.2-201ENST00000556081 394 ntBASIC4.24□□□□□ -1.73
ERCC4Q92889 AC120057.2-201ENST00000571520 271 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms