Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RPL23AP63-201ENST00000498752 471 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC093677.1-201ENST00000514414 678 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC027338.1-201ENST00000514840 825 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MIR4637-201ENST00000582405 84 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 UBE2L4-201ENST00000587688 464 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC016727.1-205ENST00000605437 569 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC068944.2-201ENST00000610373 403 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AC091834.1-201ENST00000614543 472 ntBASIC1.83□□□□□ -2.12
CCDC112Q8NEF3 AL161781.1-201ENST00000354277 403 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 RNU6-216P-201ENST00000363282 104 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 RNU6-741P-201ENST00000383889 107 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AL109755.1-201ENST00000401791 649 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 ZNF863P-201ENST00000426746 417 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 MOB1AP2-201ENST00000446060 614 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 RPL21P134-201ENST00000453468 483 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC107032.1-201ENST00000485945 480 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 RNU6-528P-201ENST00000516926 100 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC118273.2-201ENST00000532092 465 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AK6P1-201ENST00000540219 478 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC004908.2-201ENST00000609090 574 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AP005229.2-201ENST00000609980 697 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AL118556.2-201ENST00000614375 824 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC008443.7-201ENST00000622195 246 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC087821.2-201ENST00000637086 450 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 AC010889.1-201ENST00000566193 2666 ntBASIC1.82□□□□□ -2.12
CCDC112Q8NEF3 ZNF702P-202ENST00000434269 1966 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 Y_RNA.25-201ENST00000362528 102 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RNU1-17P-201ENST00000363022 152 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RNU5E-8P-201ENST00000363502 116 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RNU6-707P-201ENST00000364647 95 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RNU6-140P-201ENST00000384566 108 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AL512604.1-201ENST00000404812 257 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC092427.1-201ENST00000439177 601 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC003989.2-201ENST00000440224 169 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 BTBD7P2-201ENST00000441962 620 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RPL23AP3-201ENST00000453844 468 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC080013.2-201ENST00000460866 323 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC055855.1-201ENST00000489563 579 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 LTV1P1-201ENST00000510683 1237 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AP001189.2-201ENST00000527320 189 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 MIR4299-201ENST00000577899 72 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC007349.4-201ENST00000608114 532 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 FTX_3.1-201ENST00000610451 147 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC104763.3-201ENST00000613765 618 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC108479.2-201ENST00000617314 601 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AL603758.1-201ENST00000618654 241 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 AC002550.2-201ENST00000621246 394 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 MIR1322-201ENST00000638013 71 ntBASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CCDC112Q8NEF3 RNU6-468P-201ENST00000384003 109 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 SNORD65.1-201ENST00000390889 71 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 RPL23AP29-201ENST00000397284 453 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC096649.2-201ENST00000416186 393 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 MTCO2P1-201ENST00000424648 477 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 UBE2D3P3-201ENST00000426992 425 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC007919.1-201ENST00000429380 217 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 MED14P1-201ENST00000430517 648 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 SEPT7P5-201ENST00000434048 306 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AL360221.1-201ENST00000445989 335 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 HMGB1P36-201ENST00000487709 576 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC026801.1-201ENST00000497178 464 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC108729.3-201ENST00000513484 108 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC084851.1-201ENST00000529105 249 ntBASIC1.8□□□□□ -2.12
CCDC112Q8NEF3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms