Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 RN7SL132P-201ENST00000478131 296 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 RPL7P43-201ENST00000478876 753 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 Y_RNA.654-201ENST00000497848 106 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 RNU6-988P-201ENST00000519081 107 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC008489.1-201ENST00000524271 483 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 HSPE1P5-201ENST00000561489 272 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 MIR5583-1-201ENST00000580941 59 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 MIR4503-201ENST00000582187 83 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AC022893.3-201ENST00000607665 437 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 Z82243.1-201ENST00000609432 473 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AL390240.1-201ENST00000612950 384 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 AL110115.1-201ENST00000614396 364 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 MIR8059-201ENST00000620427 81 ntBASIC3.84□□□□□ -1.79
SIMC1Q8NDZ2 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 MTND4P1-201ENST00000457501 1466 ntBASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.84□□□□□ -1.8
SIMC1Q8NDZ2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC121333.1-201ENST00000567488 2709 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 SPRR2C-201ENST00000290702 219 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-331P-201ENST00000384724 107 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 MIR568-201ENST00000385036 95 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP317-201ENST00000410176 116 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP311-201ENST00000411290 116 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 TMEM167AP1-201ENST00000423409 219 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 OR4C10P-201ENST00000434991 931 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 SNRPEP4-201ENST00000435815 279 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 FABP5P14-201ENST00000437273 393 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC008481.1-201ENST00000463278 396 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 TRBVA-201ENST00000498804 316 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RPL39P5-202ENST00000512505 151 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 SNORA70.16-201ENST00000516390 95 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 SNORA31.22-201ENST00000517204 135 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC100870.1-201ENST00000522035 505 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 COX6CP5-201ENST00000527162 228 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AP000763.2-201ENST00000540641 163 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 MIR4790-201ENST00000577799 79 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 MIR3668-201ENST00000582138 75 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC007938.3-201ENST00000604965 623 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AL591034.3-201ENST00000605511 685 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AP001486.3-201ENST00000615334 372 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 uc_338.11-201ENST00000619132 160 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AL136313.1-201ENST00000624804 202 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 AC244205.2-202ENST00000635781 342 ntBASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SIMC1Q8NDZ2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AC118273.1-201ENST00000525324 3006 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 CUL1P1-201ENST00000509510 2425 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 AL136164.4-201ENST00000625013 2135 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 Y_RNA.112-201ENST00000363250 102 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-179P-201ENST00000363350 107 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 SNORD113-7-201ENST00000363762 77 ntBASIC3.82□□□□□ -1.8
SIMC1Q8NDZ2 RNU6-1188P-201ENST00000363795 107 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms