Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC027309.3-201ENST00000623419 351 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.56□□□□□ -1.84
USP38Q8NB14 OR5H6-203ENST00000642105 978 ntBASIC3.56□□□□□ -1.84
USP38Q8NB14 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.56□□□□□ -1.84
USP38Q8NB14 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP38Q8NB14 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
USP38Q8NB14 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.56□□□□□ -1.84
USP38Q8NB14 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.56□□□□□ -1.84
USP38Q8NB14 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
USP38Q8NB14 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
USP38Q8NB14 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
USP38Q8NB14 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AC007785.2-201ENST00000598627 1916 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.55□□□□□ -1.84
USP38Q8NB14 SNORA7.4-201ENST00000384249 137 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.55□□□□□ -1.84
USP38Q8NB14 RPS20P22-201ENST00000473700 357 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 RPL30P5-201ENST00000494923 336 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AC107401.1-201ENST00000503426 685 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 MTND2P33-201ENST00000506452 1031 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AC117522.1-201ENST00000509821 380 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AC008885.1-201ENST00000514930 301 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 RNU1-143P-201ENST00000516296 146 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.55□□□□□ -1.84
USP38Q8NB14 AL121992.2-201ENST00000606262 256 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 U1.23-201ENST00000610293 146 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 RNU1-68P-201ENST00000615382 146 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 AL158209.2-201ENST00000619266 216 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 U1.39-201ENST00000621562 146 ntBASIC3.55□□□□□ -1.84
USP38Q8NB14 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.55□□□□□ -1.84
USP38Q8NB14 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
USP38Q8NB14 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
USP38Q8NB14 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP38Q8NB14 FAM35BP-202ENST00000497389 3337 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP38Q8NB14 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP38Q8NB14 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
USP38Q8NB14 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
USP38Q8NB14 RNU6-946P-201ENST00000383878 107 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 RNU6-741P-201ENST00000383889 107 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 MIR1-2-201ENST00000384961 85 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.54□□□□□ -1.84
USP38Q8NB14 AC114491.1-201ENST00000416095 246 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC003685.2-201ENST00000422795 395 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 MED13P1-201ENST00000428342 171 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC073464.1-201ENST00000429823 534 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 MTCO2P11-201ENST00000431069 680 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC108938.1-201ENST00000451204 136 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC093899.1-201ENST00000457984 376 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 RPL30P14-201ENST00000482744 348 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.54□□□□□ -1.84
USP38Q8NB14 AC006445.2-201ENST00000510061 472 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 RNU6-927P-201ENST00000516199 100 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 RNA5SP290-201ENST00000517133 127 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.54□□□□□ -1.84
USP38Q8NB14 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.54□□□□□ -1.84
USP38Q8NB14 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.54□□□□□ -1.84
USP38Q8NB14 AL158032.1-201ENST00000605401 106 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 AC136475.10-201ENST00000620253 385 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 MIR622-201ENST00000638396 96 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 TPTE2P4-201ENST00000258589 1605 ntBASIC3.54□□□□□ -1.84
USP38Q8NB14 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.54□□□□□ -1.84
USP38Q8NB14 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP38Q8NB14 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP38Q8NB14 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.53□□□□□ -1.84
USP38Q8NB14 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USP38Q8NB14 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USP38Q8NB14 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP38Q8NB14 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP38Q8NB14 UBE2L2-201ENST00000254302 429 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 MIR148B-201ENST00000362252 99 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RNU1-70P-201ENST00000362618 164 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 Y_RNA.41-201ENST00000362646 102 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RNU6-960P-201ENST00000364056 120 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RNU6-512P-201ENST00000364438 103 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RNU2-9P-201ENST00000410194 145 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 Z85995.1-201ENST00000415547 335 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RPL21P40-201ENST00000428586 483 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 RPS20P5-201ENST00000434808 360 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 AC002486.1-201ENST00000435098 391 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 HMGB3P12-201ENST00000438745 556 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.53□□□□□ -1.84
USP38Q8NB14 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP38Q8NB14 AC079781.2-201ENST00000446424 169 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 AC132479.1-201ENST00000449160 144 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
USP38Q8NB14 AC091179.1-201ENST00000461606 579 ntBASIC3.53□□□□□ -1.84
USP38Q8NB14 UBL5P3-201ENST00000475112 231 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms