Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RNU6-946P-201ENST00000383878 107 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 MIR454-201ENST00000390180 115 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 CYCSP19-201ENST00000411715 316 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 OR51A5P-201ENST00000415429 942 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 BX842559.1-201ENST00000419615 532 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RAC1P6-201ENST00000423911 575 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC008850.1-201ENST00000427546 362 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 USP12PX-201ENST00000432383 1057 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC020550.1-201ENST00000447385 163 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 SNORD97-201ENST00000459187 142 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RPS23P3-201ENST00000470993 430 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RPS27AP1-201ENST00000475545 471 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RN7SL20P-201ENST00000488827 297 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RBBP4P6-201ENST00000508098 202 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RNU6-507P-201ENST00000516045 100 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 RNU6-840P-201ENST00000517275 65 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AP005435.4-201ENST00000529514 284 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 OR5AL2P-201ENST00000532185 920 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC093012.1-202ENST00000549403 582 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC073657.2-201ENST00000605661 303 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC008945.2-201ENST00000606056 604 ntBASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 FER-210ENST00000628534 558 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LRRTM1Q86UE6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RNU5A-1-201ENST00000362698 116 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 Y_RNA.70-201ENST00000362886 110 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 SNORA62.3-201ENST00000365110 153 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 U8.9-201ENST00000365667 134 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL031121.1-201ENST00000406553 254 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RN7SKP140-201ENST00000411196 284 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC073415.1-201ENST00000449240 153 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 SSXP4-201ENST00000451349 245 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL356010.1-201ENST00000456364 102 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RNU7-63P-201ENST00000459054 62 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RNU6-261P-201ENST00000459506 102 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 FTH1P2-201ENST00000466086 412 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AP004217.1-201ENST00000480579 346 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RN7SL432P-201ENST00000484057 298 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 PRDX4P1-201ENST00000507189 574 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC098799.2-201ENST00000509466 868 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC117522.1-201ENST00000509821 380 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC074344.1-201ENST00000512823 224 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 RN7SKP219-201ENST00000516825 296 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC007536.1-201ENST00000533382 349 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 HIF1AP1-201ENST00000553642 175 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL121579.1-201ENST00000555129 305 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC093227.2-201ENST00000589357 285 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL627309.6-201ENST00000606857 840 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC069234.5-201ENST00000611056 416 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AL390240.1-201ENST00000612950 384 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC092794.2-201ENST00000620933 563 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC011155.2-201ENST00000623202 216 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC025034.2-201ENST00000623264 286 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC024614.3-201ENST00000637860 256 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC099654.14-201ENST00000638599 341 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 Z83843.1-201ENST00000604070 3685 ntBASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
LRRTM1Q86UE6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms