Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 MTATP6P30-201ENST00000443540 664 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 ELOCP30-201ENST00000447108 299 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 HMGN2P10-201ENST00000448085 265 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 FABP5P15-201ENST00000453566 214 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNU7-59P-201ENST00000459101 61 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC055731.1-201ENST00000474387 401 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 GZMAP1-201ENST00000503054 631 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNU6-390P-201ENST00000516259 103 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNU6-703P-201ENST00000516946 107 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 RNA5SP165-201ENST00000517142 115 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 SNORA31.25-201ENST00000517242 134 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC021739.1-201ENST00000559631 174 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC009063.1-201ENST00000563342 702 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 MIR5092-201ENST00000583139 88 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC069431.2-201ENST00000604149 1099 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL355598.1-201ENST00000604169 202 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL161798.1-201ENST00000604630 131 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL162373.1-201ENST00000620433 407 ntBASIC1.55□□□□□ -2.16
SCXQ7RTU7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.55□□□□□ -2.16
SCXQ7RTU7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 RNU1-91P-201ENST00000364746 163 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 MIR19A-201ENST00000384878 82 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 SNORA46.1-201ENST00000391069 153 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AL359704.1-201ENST00000411586 781 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 BX276092.3-201ENST00000424182 230 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 TXNL1P1-201ENST00000429528 554 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 WARS2P1-201ENST00000429678 537 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC004383.1-201ENST00000438135 289 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC010095.1-201ENST00000443543 144 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AL353705.4-201ENST00000449661 238 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 PSPHP1-201ENST00000450062 261 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 SNORA31.3-201ENST00000516029 96 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC087241.2-201ENST00000535801 324 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC105137.2-201ENST00000569073 466 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 MIR4765-201ENST00000585007 77 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC008749.1-201ENST00000597650 306 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC098826.3-201ENST00000603823 466 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC104763.2-201ENST00000604179 382 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCXQ7RTU7 uc_338.14-201ENST00000613162 166 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AL049777.1-201ENST00000622740 518 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 AL359757.2-201ENST00000624309 274 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
SCXQ7RTU7 AC006020.1-201ENST00000420179 1854 ntBASIC1.54□□□□□ -2.16
SCXQ7RTU7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SCXQ7RTU7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
SCXQ7RTU7 MIRLET7G-201ENST00000362280 84 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 RNA5SP456-201ENST00000364002 114 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 U6atac.2-201ENST00000408644 118 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 RN7SKP158-201ENST00000410453 326 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 BTF3L4P3-201ENST00000418879 476 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 MTCO2P17-201ENST00000424336 677 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 RPS3AP44-201ENST00000425466 790 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 Z98742.2-201ENST00000431564 187 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC098826.1-201ENST00000433943 471 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 FABP5P14-201ENST00000437273 393 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC005094.1-201ENST00000440420 368 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 RPS29P21-201ENST00000496272 170 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AF213884.2-201ENST00000510417 903 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC107222.1-201ENST00000510899 637 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 RNU2-19P-201ENST00000517288 84 ntBASIC1.53□□□□□ -2.16
SCXQ7RTU7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.53□□□□□ -2.16
SCXQ7RTU7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms