Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1040P-201ENST00000383974 107 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-95P-201ENST00000384697 107 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RNU4-6P-201ENST00000410804 122 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-607P-201ENST00000411283 108 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC063979.1-201ENST00000415539 377 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RPL27AP8-201ENST00000424277 446 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 HSPD1P21-201ENST00000436541 245 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 RPL23AP46-201ENST00000438548 490 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AL360271.2-201ENST00000447710 161 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AP000926.1-201ENST00000479573 241 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 HMGB1P30-201ENST00000492455 606 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC009902.1-201ENST00000519351 183 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 MIR1273C-201ENST00000578669 77 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC073539.2-201ENST00000597113 165 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC018462.2-201ENST00000605375 395 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AP000654.2-201ENST00000605633 586 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 MIR432-201ENST00000606207 94 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC008121.3-201ENST00000618726 433 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AL031601.2-202ENST00000622650 282 ntBASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RUFY4Q6ZNE9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1167P-201ENST00000363227 94 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 SNORA75B-201ENST00000384053 137 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 Y_RNA.646-201ENST00000410980 101 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AL353621.1-201ENST00000418219 243 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC007389.2-201ENST00000434630 306 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 HIGD1AP11-201ENST00000438361 280 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC133473.1-201ENST00000455173 299 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 RPL23AP31-201ENST00000456160 467 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC084198.1-201ENST00000477747 402 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC017037.1-201ENST00000508460 471 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC026782.1-201ENST00000512952 449 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 RNU6-1315P-201ENST00000517187 99 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 IGKV2D-23-201ENST00000518179 286 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC023442.1-201ENST00000531247 422 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC008739.3-201ENST00000603262 127 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AC002044.1-201ENST00000606707 158 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 AL355810.1-201ENST00000614629 552 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 PLCE1P1-201ENST00000622094 305 ntBASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RUFY4Q6ZNE9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
RUFY4Q6ZNE9 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
RUFY4Q6ZNE9 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
RUFY4Q6ZNE9 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC074029.4-201ENST00000624796 1859 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 MIR578-201ENST00000384828 96 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 MIR200C-201ENST00000384980 68 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 RNU6-1050P-201ENST00000410388 107 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC006011.1-201ENST00000442758 349 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AL035666.1-201ENST00000446195 348 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 SNORD5.1-201ENST00000458800 75 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 snoU13.22-201ENST00000459428 104 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 RPS26P15-201ENST00000488067 348 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AL049874.1-201ENST00000489560 388 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC146944.2-203ENST00000502493 354 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC139495.1-202ENST00000513164 354 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC090281.1-201ENST00000523019 276 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 MED28P6-201ENST00000558776 231 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC136443.5-201ENST00000603741 370 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AP002826.1-201ENST00000608835 315 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AC005344.1-201ENST00000613391 459 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 AL512643.1-201ENST00000635735 524 ntBASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RUFY4Q6ZNE9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RUFY4Q6ZNE9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms