Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC006362.1-201ENST00000567392 174 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 MIR3913-1-201ENST00000577744 102 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC245008.1-201ENST00000608123 476 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC135507.2-201ENST00000612443 309 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC048344.4-201ENST00000619744 527 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 AC091903.1-201ENST00000624322 454 ntBASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX30Q5VWJ9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AP003122.5-201ENST00000527668 3766 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RNU6-1097P-201ENST00000363586 107 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RNU1-140P-201ENST00000365040 165 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RNU6-169P-201ENST00000365336 107 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 UBA52P6-201ENST00000399822 382 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RNU6-387P-201ENST00000411331 105 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AL365338.1-201ENST00000422282 858 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC133104.1-201ENST00000429100 218 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RPL31P35-201ENST00000431058 377 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 MTCO3P5-201ENST00000433620 714 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RPS24P13-201ENST00000442520 397 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC128713.1-201ENST00000471495 306 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RN7SKP298-201ENST00000515950 94 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AL359212.1-201ENST00000556608 614 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC006566.1-201ENST00000608943 513 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AC005332.10-201ENST00000612725 619 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AL162274.2-201ENST00000614406 332 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 AL035425.3-201ENST00000564206 4996 ntBASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX30Q5VWJ9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC092435.3-201ENST00000565538 3654 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 RNU6-108P-201ENST00000365558 107 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 SNORA75-201ENST00000384158 137 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 RN7SKP58-201ENST00000411010 305 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 CDK8P2-201ENST00000415020 547 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AL365496.1-201ENST00000426885 215 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AL592045.1-201ENST00000429867 352 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AL591704.1-201ENST00000432574 275 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC022364.2-201ENST00000457963 554 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 MRPS17P3-201ENST00000465453 385 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 MTCO2P4-201ENST00000517968 247 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC022634.1-201ENST00000520765 532 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC012213.3-201ENST00000577199 777 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 MIR4528-201ENST00000577763 90 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC005498.1-201ENST00000592125 465 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AL139286.2-201ENST00000606838 396 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC093732.2-201ENST00000607950 274 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC011939.3-201ENST00000613686 466 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AL512643.1-201ENST00000635735 524 ntBASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX30Q5VWJ9 RNU1-73P-201ENST00000383971 164 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RNU6-1042P-201ENST00000384204 107 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 RNU6-348P-201ENST00000384386 107 ntBASIC3.22□□□□□ -1.89
SNX30Q5VWJ9 SNORA46-201ENST00000384762 135 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms