Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC074029.2-201ENST00000551045 634 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 AC245128.3-201ENST00000594721 748 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 MIR6718-201ENST00000616153 80 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 MTND4P12-201ENST00000498999 1377 ntBASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.38□□□□□ -2.35
VPS13DQ5THJ4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 SNORD26-201ENST00000384147 75 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AL031577.2-201ENST00000404133 280 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 RPL30P13-201ENST00000418873 348 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 TRGVB-201ENST00000453257 471 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 NDUFB4P2-201ENST00000509515 391 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AL391261.3-201ENST00000557194 520 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 RNA5SP331-201ENST00000364986 107 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 UBE2FP1-201ENST00000416536 447 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 HSPE1P21-201ENST00000438283 308 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 RN7SKP34-201ENST00000516142 244 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 RNU6-229P-201ENST00000516614 102 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC005786.1-201ENST00000588553 154 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC012254.4-201ENST00000588843 273 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC008945.2-201ENST00000606056 604 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC068880.5-201ENST00000624331 290 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 RNU6-288P-201ENST00000363690 104 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 Y_RNA.412-201ENST00000384001 104 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 MIR153-1-201ENST00000384914 90 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 MIR618-201ENST00000385287 98 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC104692.1-201ENST00000472406 90 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 AP006587.4-201ENST00000526053 529 ntBASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
VPS13DQ5THJ4 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 MTND2P9-201ENST00000422293 931 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 MTCYBP41-201ENST00000528913 1123 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 uc_338.22-201ENST00000622722 187 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 RNU6-335P-201ENST00000364563 113 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 RNA5SP285-201ENST00000516619 119 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AC025594.3-201ENST00000613068 790 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AC241584.1-201ENST00000438469 1241 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 LINC00557-201ENST00000563184 1279 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AL161423.1-201ENST00000613700 262 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AP003497.1-201ENST00000528472 562 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 MIR4636-201ENST00000582271 80 ntBASIC0.36□□□□□ -2.35
VPS13DQ5THJ4 AL022578.1-201ENST00000439330 1433 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AP000776.1-201ENST00000530032 1663 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 HSBP1P2-201ENST00000299671 229 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RNF2P1-201ENST00000442955 1010 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RPS24P6-201ENST00000452670 400 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC010301.1-201ENST00000473936 355 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 EIF4EP3-201ENST00000498782 656 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AL136313.1-201ENST00000624804 202 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RNU6-115P-201ENST00000364310 107 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RN7SKP61-201ENST00000410642 295 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC023050.1-201ENST00000498198 304 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC087359.1-201ENST00000508335 1740 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RNU6-418P-201ENST00000384035 107 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC004817.2-201ENST00000561794 651 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AL121890.5-201ENST00000620848 304 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 MTCO1P23-201ENST00000415223 1526 ntBASIC0.35□□□□□ -2.35
VPS13DQ5THJ4 RNU1-105P-201ENST00000363470 161 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AL031183.1-201ENST00000457667 207 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 OR2A41P-201ENST00000473586 105 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AC121161.1-201ENST00000510606 652 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AP003327.1-201ENST00000529684 127 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AL355802.3-201ENST00000607571 545 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 RNU6-1218P-201ENST00000458990 108 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AL121839.1-201ENST00000556233 1185 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 MIR4802-201ENST00000581881 80 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 AC023932.2-201ENST00000603176 175 ntBASIC0.34□□□□□ -2.35
VPS13DQ5THJ4 MIR126-201ENST00000362291 85 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 MIR329-2-201ENST00000385029 84 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 MIR146A-201ENST00000385201 99 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 HSPE1P19-201ENST00000603327 295 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AL021879.1-201ENST00000611756 288 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 SNRPEP3-201ENST00000338402 276 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 RNA5SP299-201ENST00000391203 116 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 RPL7P30-201ENST00000420888 709 ntBASIC0.34□□□□□ -2.36
VPS13DQ5THJ4 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms