Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.18□□□□□ -1.9
PRICKLE4Q2TBC4 ADAM3A-203ENST00000461344 2157 ntBASIC3.18□□□□□ -1.9
PRICKLE4Q2TBC4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 Y_RNA.6-201ENST00000362350 114 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6-778P-201ENST00000363269 103 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNA5SP197-201ENST00000363357 119 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 Y_RNA.409-201ENST00000383990 98 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 MIR449B-201ENST00000384995 97 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6-550P-201ENST00000391057 101 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6-192P-201ENST00000391253 100 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL356057.2-201ENST00000403318 432 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL591416.1-201ENST00000404015 867 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RPS15AP9-201ENST00000439856 381 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL078601.1-201ENST00000444542 271 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 MRPS31P2-201ENST00000451581 518 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6-261P-201ENST00000459506 102 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RPL9P33-201ENST00000484311 566 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 HMGB1P30-201ENST00000492455 606 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC139453.3-201ENST00000493276 369 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 SUMO2P6-201ENST00000505273 288 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC098591.2-201ENST00000510152 315 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RNU6-572P-201ENST00000516724 80 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC022634.1-201ENST00000520765 532 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC025755.1-201ENST00000521306 278 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 IGHV3-76-201ENST00000522465 295 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC016957.1-201ENST00000534895 309 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 DEFB131E-202ENST00000602581 683 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL355877.2-201ENST00000603670 358 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC012468.1-201ENST00000604888 430 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC004492.1-201ENST00000607036 742 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 U7.8-201ENST00000619968 63 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 ELF2P3-201ENST00000445099 1506 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC110491.1-201ENST00000562191 2010 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC091564.4-201ENST00000533934 2194 ntBASIC3.17□□□□□ -1.9
PRICKLE4Q2TBC4 AC017071.1-201ENST00000564407 2204 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 MIR412-201ENST00000362142 91 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 MIR490-201ENST00000384865 128 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AL590002.1-201ENST00000406554 418 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC126124.2-201ENST00000413542 321 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 RPS15AP5-201ENST00000436276 388 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 CYCSP32-201ENST00000440548 321 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 RN7SL293P-201ENST00000481765 281 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AL163973.1-201ENST00000484753 577 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 RPL21P13-201ENST00000488305 481 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC093663.1-201ENST00000497190 394 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC009646.1-201ENST00000510455 318 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 MIR2276-201ENST00000516886 89 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 SNORA31.19-201ENST00000517079 126 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC025281.1-201ENST00000567026 265 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC007621.1-201ENST00000604544 437 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 U4.5-201ENST00000617137 123 ntBASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRICKLE4Q2TBC4 AC027514.1-201ENST00000588561 1603 ntBASIC3.15□□□□□ -1.9
PRICKLE4Q2TBC4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PRICKLE4Q2TBC4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRICKLE4Q2TBC4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PRICKLE4Q2TBC4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRICKLE4Q2TBC4 Y_RNA.41-201ENST00000362646 102 ntBASIC3.15□□□□□ -1.91
PRICKLE4Q2TBC4 RNA5SP119-201ENST00000362715 117 ntBASIC3.15□□□□□ -1.91
PRICKLE4Q2TBC4 RNA5SP50-201ENST00000363731 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms