Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 ART2BP-201ENST00000453501 499 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 MTND1P9-201ENST00000453775 944 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AP1S2P1-201ENST00000457344 379 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 RBM43P1-201ENST00000476891 1081 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AL135752.1-201ENST00000479477 471 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 HMGB1P41-201ENST00000520234 440 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AC090888.1-201ENST00000561335 1141 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AL359757.2-201ENST00000624309 274 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 AC091965.5-201ENST00000624785 342 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 MIR1291-201ENST00000627649 87 ntBASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHROOM1Q2M3G4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 RNU5F-7P-201ENST00000363696 115 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 Y_RNA.169-201ENST00000363745 96 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 RNU6-741P-201ENST00000383889 107 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MIR524-201ENST00000385242 87 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AL079342.1-201ENST00000401460 267 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MIR1289-2-201ENST00000408360 111 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC007064.1-201ENST00000412238 351 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MTND1P21-201ENST00000412991 285 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 RPL37P21-201ENST00000435890 276 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MTATP6P30-201ENST00000443540 664 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 DDX3P2-201ENST00000446138 111 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 EPS15P1-201ENST00000448836 336 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC233279.1-201ENST00000455300 423 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 snoU13.15-201ENST00000459407 104 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 snoU13.26-201ENST00000459452 105 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC010631.1-201ENST00000474150 156 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MRPS33P3-201ENST00000513456 322 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC114797.1-201ENST00000514003 728 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 MTND4LP18-201ENST00000526864 291 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 GLYCAM1-201ENST00000546596 285 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC109446.2-201ENST00000567872 497 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 OR1M4P-201ENST00000589199 287 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 AC068790.3-201ENST00000602988 553 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 DPPA3P3-201ENST00000603842 430 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 OR10AB1P-201ENST00000609613 938 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SHROOM1Q2M3G4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.97
SHROOM1Q2M3G4 AC016717.2-201ENST00000609089 5141 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 Y_RNA.46-201ENST00000362695 102 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-461P-201ENST00000364195 107 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RPS20P2-201ENST00000402520 389 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RPL21P24-201ENST00000413752 448 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 USP9YP26-201ENST00000421008 661 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC009414.1-201ENST00000427200 443 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RPL35AP22-201ENST00000436855 335 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 ELOCP30-201ENST00000447108 299 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RPS20P20-201ENST00000460498 340 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 BZW1P2-201ENST00000473537 826 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 RNU6-232P-201ENST00000517144 64 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AP002770.2-201ENST00000543613 532 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC123904.2-201ENST00000548059 300 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC090616.2-202ENST00000584248 222 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AC023043.3-201ENST00000593113 385 ntBASIC2.77□□□□□ -1.97
SHROOM1Q2M3G4 AP000403.1-201ENST00000603349 851 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms