Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC013553.2-201ENST00000604244 589 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC021851.1-201ENST00000608537 1082 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 AC021755.4-201ENST00000616620 456 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 U4atac.1-201ENST00000618345 95 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 MIR3199-2-201ENST00000636243 86 ntBASIC1.5□□□□□ -2.17
RFX7Q2KHR2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.5□□□□□ -2.17
RFX7Q2KHR2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 MTCO1P18-201ENST00000455518 1419 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 RNU1-62P-201ENST00000362599 164 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 SNORA23-201ENST00000365128 182 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 UBE2V1P11-201ENST00000411559 285 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 MTND5P25-201ENST00000430499 799 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AL592447.1-201ENST00000447592 540 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AC008834.1-201ENST00000511612 175 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 MIR892C-201ENST00000516410 77 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AC016957.1-201ENST00000534895 309 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 AC097504.2-201ENST00000608088 454 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 MIR6515-201ENST00000619843 57 ntBASIC1.49□□□□□ -2.17
RFX7Q2KHR2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
RFX7Q2KHR2 CISD1P1-201ENST00000393907 327 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AL355615.1-201ENST00000406187 641 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AP000949.1-201ENST00000438328 629 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 RPS29P1-201ENST00000465274 159 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 COX6CP14-201ENST00000469580 174 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC034244.1-201ENST00000507687 207 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC090821.2-201ENST00000523552 176 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AL137100.2-201ENST00000555786 315 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC009318.4-201ENST00000620496 486 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 MKKS-204ENST00000639674 192 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 LINC02211-204ENST00000642024 1070 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 AC025263.3-201ENST00000622965 1396 ntBASIC1.48□□□□□ -2.17
RFX7Q2KHR2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RFX7Q2KHR2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RNU1-93P-201ENST00000364704 169 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 MIR520E-201ENST00000384867 87 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RNA5SP212-201ENST00000391223 107 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AL357134.1-201ENST00000445848 426 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 PABPC1P3-201ENST00000469174 459 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC093767.1-201ENST00000504523 156 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RNU6-27P-201ENST00000516146 107 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 VN1R88P-201ENST00000596787 292 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC073413.2-201ENST00000604332 360 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 MIR6779-201ENST00000617283 64 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC008121.3-201ENST00000618726 433 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC011330.2-201ENST00000621680 635 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RNA5SP325-201ENST00000363756 130 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RNU6-1083P-201ENST00000384022 107 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RAC1P7-201ENST00000445367 377 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RPS4XP11-201ENST00000446897 772 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 HMGN2P18-201ENST00000450680 270 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 RPS15AP17-201ENST00000470598 390 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC093752.1-206ENST00000511823 336 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 ZNF705CP-201ENST00000530515 889 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC068135.2-201ENST00000569293 1028 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC068276.1-201ENST00000605793 379 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 AC091925.2-201ENST00000625059 256 ntBASIC1.47□□□□□ -2.17
RFX7Q2KHR2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AL589655.1-201ENST00000405398 482 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AL133384.1-201ENST00000412744 351 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 SRIP3-201ENST00000413200 219 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AC244636.1-201ENST00000421152 228 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AC096920.1-201ENST00000423991 241 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.46□□□□□ -2.18
RFX7Q2KHR2 SCARNA3-201ENST00000517097 143 ntBASIC1.46□□□□□ -2.18
RFX7Q2KHR2 MTCYBP27-201ENST00000555160 670 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms