Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AC103851.1-201ENST00000506833 274 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AC087241.2-201ENST00000535801 324 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.03□□□□□ -1.76
SF3B3Q15393 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.03□□□□□ -1.76
SF3B3Q15393 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.03□□□□□ -1.76
SF3B3Q15393 AL451007.1-201ENST00000595491 289 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC021646.1-201ENST00000605469 484 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 uc_338.1-201ENST00000612113 180 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC110801.1-201ENST00000623590 212 ntBASIC4.03□□□□□ -1.76
SF3B3Q15393 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.03□□□□□ -1.76
SF3B3Q15393 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SF3B3Q15393 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SF3B3Q15393 MTND4P35-201ENST00000604257 1375 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 AC004972.1-201ENST00000623934 2209 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 ZNF807-201ENST00000328088 1707 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-335P-201ENST00000364563 113 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 MIR514A2-201ENST00000385131 88 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 MIR514A3-201ENST00000385132 88 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-278P-201ENST00000390945 109 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-510P-201ENST00000391239 108 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-193P-201ENST00000410977 107 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.02□□□□□ -1.77
SF3B3Q15393 DUTP6-201ENST00000425573 462 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 OR2AS1P-201ENST00000427827 319 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 IFNA20P-201ENST00000436840 528 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 HMGB1P12-201ENST00000438594 598 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 VN1R17P-201ENST00000472048 1090 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-277P-201ENST00000516272 106 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 RN7SKP219-201ENST00000516825 296 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-798P-201ENST00000516912 103 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 RNU6-1314P-201ENST00000517139 104 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AP005435.4-201ENST00000529514 284 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 SYF2P1-201ENST00000550658 413 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AL133153.1-201ENST00000557756 303 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.02□□□□□ -1.77
SF3B3Q15393 LARP7P3-201ENST00000579888 337 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 uc_338.5-201ENST00000611839 155 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC130324.3-201ENST00000614165 542 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 U73479.1-201ENST00000618062 168 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC040168.1-201ENST00000623594 991 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 TPTEP1-208ENST00000636884 213 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.02□□□□□ -1.77
SF3B3Q15393 AL035425.3-201ENST00000564206 4996 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 AC091152.2-201ENST00000591628 2569 ntBASIC4.02□□□□□ -1.77
SF3B3Q15393 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SF3B3Q15393 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
SF3B3Q15393 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 AL139276.1-201ENST00000311910 1001 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 SNORA80A-201ENST00000363922 136 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 RNU4-20P-201ENST00000365601 151 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SF3B3Q15393 SNORA44-201ENST00000384584 132 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 U3.26-201ENST00000391236 204 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 MTND3P8-201ENST00000412909 339 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC009161.1-201ENST00000417306 376 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AL645937.1-202ENST00000421799 937 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 ARF4P2-201ENST00000430209 526 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.01□□□□□ -1.77
SF3B3Q15393 AC016696.1-201ENST00000446949 318 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 MTND3P16-201ENST00000452205 344 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 snoU109.4-201ENST00000458953 143 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 RNU7-170P-201ENST00000459303 61 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC004062.1-201ENST00000509926 645 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 RNU4-29P-201ENST00000515943 174 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 RNU2-10P-201ENST00000516375 211 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 BTF3P12-201ENST00000519620 469 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.01□□□□□ -1.77
SF3B3Q15393 AL133271.1-201ENST00000538229 291 ntBASIC4.01□□□□□ -1.77
SF3B3Q15393 BNIP3P6-201ENST00000549284 499 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms