Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC009961.3-201ENST00000449832 765 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 AC098826.2-201ENST00000452011 651 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 AP1S2P1-201ENST00000457344 379 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 AC021382.1-201ENST00000483523 359 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 RPL23AP63-201ENST00000498752 471 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 RNA5SP490-201ENST00000517141 136 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 AC091163.3-201ENST00000518269 1144 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 HSPE1P20-201ENST00000538133 289 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.72□□□□□ -1.97
PTCH1Q13635 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.72□□□□□ -1.97
PTCH1Q13635 AC091953.2-201ENST00000623979 160 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PTCH1Q13635 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PTCH1Q13635 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
PTCH1Q13635 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTCH1Q13635 RNU6-343P-201ENST00000364709 104 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MIR627-201ENST00000384979 97 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 ANAPC10P1-201ENST00000395991 556 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 RNU6-516P-201ENST00000411381 104 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MTND1P21-201ENST00000412991 285 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AL358075.3-201ENST00000426289 226 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MTCO3P30-201ENST00000426425 670 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MTATP6P17-201ENST00000431030 672 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 Z82210.1-201ENST00000440037 231 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MTCO1P53-201ENST00000441633 699 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 PIGFP3-201ENST00000441918 722 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AL358794.1-201ENST00000445689 381 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AL031313.1-201ENST00000448435 256 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 RPL31P41-201ENST00000477967 372 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 LARP1BP2-201ENST00000486594 519 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC007182.2-201ENST00000489251 402 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 RPS29P11-201ENST00000496507 171 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC098862.1-201ENST00000504991 413 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.71□□□□□ -1.98
PTCH1Q13635 SEM1P1-201ENST00000506694 209 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.71□□□□□ -1.98
PTCH1Q13635 AC098799.2-201ENST00000509466 868 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.71□□□□□ -1.98
PTCH1Q13635 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.71□□□□□ -1.98
PTCH1Q13635 TRAV28-201ENST00000557548 323 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.71□□□□□ -1.98
PTCH1Q13635 AC010546.1-201ENST00000569391 485 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 MTATP6P24-201ENST00000576835 677 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AC103810.1-201ENST00000579873 453 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
PTCH1Q13635 AC093838.1-201ENST00000613014 469 ntBASIC2.71□□□□□ -1.98
PTCH1Q13635 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.71□□□□□ -1.98
PTCH1Q13635 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PTCH1Q13635 ZNF29P-201ENST00000225587 168 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 Y_RNA.311-201ENST00000365068 96 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 SNORA23-201ENST00000365128 182 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 Y_RNA.472-201ENST00000384322 102 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.7□□□□□ -1.98
PTCH1Q13635 UBE2V1P13-201ENST00000436983 439 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 SNRPEP7-201ENST00000438350 220 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 MTCYBP3-201ENST00000445588 1137 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 AC068781.1-201ENST00000488231 618 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC138853.1-201ENST00000503549 823 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC026407.1-201ENST00000518369 204 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCH1Q13635 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCH1Q13635 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 PRELID2P1-201ENST00000552837 301 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AGGF1P5-201ENST00000567900 919 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 AL355877.2-201ENST00000603670 358 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.7□□□□□ -1.98
PTCH1Q13635 AC019226.1-201ENST00000625666 515 ntBASIC2.7□□□□□ -1.98
PTCH1Q13635 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCH1Q13635 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PTCH1Q13635 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
PTCH1Q13635 AL627390.1-201ENST00000396055 340 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
PTCH1Q13635 USP9YP11-201ENST00000427537 717 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AC007919.1-201ENST00000429380 217 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 BNIP3P2-201ENST00000441221 577 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 MTND1P31-201ENST00000449206 961 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.69□□□□□ -1.98
PTCH1Q13635 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.69□□□□□ -1.98
PTCH1Q13635 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.69□□□□□ -1.98
PTCH1Q13635 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.69□□□□□ -1.98
PTCH1Q13635 AC024589.1-201ENST00000512207 263 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AC109445.1-201ENST00000512356 383 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 RN7SKP265-201ENST00000516448 223 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.69□□□□□ -1.98
PTCH1Q13635 DNAJC19P9-201ENST00000555084 351 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 CYCSP2-201ENST00000558168 301 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 MIR5089-201ENST00000580047 84 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 CLIC4P2-201ENST00000601934 717 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 DUXAP3-201ENST00000603616 594 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AC103710.4-201ENST00000609301 899 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AL157392.4-201ENST00000609756 345 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AC010678.1-201ENST00000614118 713 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 CR848007.1-201ENST00000442354 1699 ntBASIC2.69□□□□□ -1.98
PTCH1Q13635 AL138713.1-201ENST00000624026 2130 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms