Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 Y_RNA.560-201ENST00000384689 102 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 SNORA48.2-201ENST00000390926 124 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 FCF1P10-201ENST00000407590 479 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 Y_RNA.608-201ENST00000410647 95 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC096664.2-201ENST00000411843 406 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC096649.2-201ENST00000416186 393 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 USP9YP20-201ENST00000419224 558 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC005005.2-201ENST00000420779 380 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.31□□□□□ -2.04
RAB40BQ12829 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.31□□□□□ -2.04
RAB40BQ12829 MTND4P20-201ENST00000424125 869 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC093106.2-201ENST00000428212 385 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AL592045.1-201ENST00000429867 352 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC092427.1-202ENST00000430569 476 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.31□□□□□ -2.04
RAB40BQ12829 EPS15P1-201ENST00000448836 336 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 MTND1P12-201ENST00000455231 147 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 RNU6-953P-201ENST00000459154 107 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 RPS29P26-201ENST00000477483 171 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 MTND1P3-201ENST00000484956 952 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 RPS15AP34-201ENST00000487776 387 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 RPS3AP22-201ENST00000488297 769 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC139453.3-201ENST00000493276 369 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 MTCYBP35-201ENST00000503630 1137 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.31□□□□□ -2.04
RAB40BQ12829 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.31□□□□□ -2.04
RAB40BQ12829 RNU2-10P-201ENST00000516375 211 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.31□□□□□ -2.04
RAB40BQ12829 AC011979.2-201ENST00000527568 352 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC022080.3-201ENST00000544433 482 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.31□□□□□ -2.04
RAB40BQ12829 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.31□□□□□ -2.04
RAB40BQ12829 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AL160281.1-201ENST00000605307 311 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.31□□□□□ -2.04
RAB40BQ12829 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.31□□□□□ -2.04
RAB40BQ12829 AC135507.2-201ENST00000612443 309 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC104237.2-201ENST00000612456 443 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC011939.3-201ENST00000613686 466 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 AC079248.2-201ENST00000623779 326 ntBASIC2.31□□□□□ -2.04
RAB40BQ12829 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RAB40BQ12829 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.31□□□□□ -2.04
RAB40BQ12829 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RAB40BQ12829 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RAB40BQ12829 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RAB40BQ12829 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RAB40BQ12829 AC010889.1-201ENST00000566193 2666 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RAB40BQ12829 VTRNA1-1-201ENST00000363120 99 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU6-525P-201ENST00000363685 104 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU6-461P-201ENST00000364195 107 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 SMIM11P1-201ENST00000369586 178 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.3□□□□□ -2.04
RAB40BQ12829 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 MIR128-1-201ENST00000384921 82 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AL356057.2-201ENST00000403318 432 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU6-920P-201ENST00000410926 92 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU2-25P-201ENST00000411041 191 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 Z92545.1-201ENST00000411782 234 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RPS12P24-201ENST00000412619 387 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 EEF1A1P41-201ENST00000414667 207 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 BX682237.1-201ENST00000415016 335 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 SEPT2P1-201ENST00000419651 180 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.3□□□□□ -2.04
RAB40BQ12829 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.3□□□□□ -2.04
RAB40BQ12829 AL139132.1-201ENST00000431587 344 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 NANOGNBP1-201ENST00000448444 480 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 AC133134.1-201ENST00000466800 359 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC107626.1-201ENST00000471084 183 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 BZW1P2-201ENST00000473537 826 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC011825.1-201ENST00000484967 388 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RPL39P36-201ENST00000490784 156 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.3□□□□□ -2.04
RAB40BQ12829 MRPS33P3-201ENST00000513456 322 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.3□□□□□ -2.04
RAB40BQ12829 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU6-143P-201ENST00000516942 93 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 RNU6-1092P-201ENST00000516955 87 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.3□□□□□ -2.04
RAB40BQ12829 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.3□□□□□ -2.04
RAB40BQ12829 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.3□□□□□ -2.04
RAB40BQ12829 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RAB40BQ12829 BNIP3P9-201ENST00000603714 553 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC104763.2-201ENST00000604179 382 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.3□□□□□ -2.04
RAB40BQ12829 ADAM3A-203ENST00000461344 2157 ntBASIC2.3□□□□□ -2.04
RAB40BQ12829 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.3□□□□□ -2.04
RAB40BQ12829 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RAB40BQ12829 AL137003.2-201ENST00000606924 2538 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 NACAP2-201ENST00000318548 624 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 RNU1-112P-201ENST00000364401 164 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 RNU5E-5P-201ENST00000365379 116 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 RNU5E-6P-201ENST00000365574 115 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 UBA52P6-201ENST00000399822 382 ntBASIC2.29□□□□□ -2.04
RAB40BQ12829 AL162578.1-201ENST00000406202 378 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms